Gene PSPTO_0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0054 
Symbol 
ID1181662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp75073 
End bp75684 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content57% 
IMG OID637391432 
Producthypothetical protein 
Protein accessionNP_789914 
Protein GI28867295 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACCGG AGCTGCTGAG AGCCGGTGCT TCGCTCAGTG ATTGCTACAG GTGCGGTGCT 
GCGCTAAGCG ATGGCGCTCG GTGCGACGCT GCAGAAGCTG CGCTGGCTTT CCAGATATAC 
GTGGACGAAA ACATTGGCCG CTGGCCCTTG TACGGCTCAT CGCCACTCGA CTTTCGCGAT 
TGGTTAACTG TTGCACGAAC TTTGGTGAGC TTTGCTCAGG CAGCAGTGCG TCGCCATAGC 
GCTGCGGCTG AAAGATTCTT CGAATCACTA GGTATACCGC TTGAGTCCCT TCAACCGATT 
CCGTTGGGGT TGCCCCTTGA ATACCTGTCT CCCGCTGAGC GCTCTGTCCT GCTCAGCATC 
GTGTGGGTGA TAATGTCAGC CGGGCCACAA AGATTTATCG AAGCGGCACG GCATGAGTCA 
CTTCCAGCCT CGACGCTGCA TTTACCCACC AGTGGTTCTC CTCCAGTTTT GCTGGATCTG 
GTCGCCGCAT TGCAGTCGCC CAGGCATCAT CTGGTGAGCG GTGTTGACCG TGAACATCCC 
AGTAGCCCCG CGCAAACGCT GCGTATGTGG TTGCGACTGA AACGAAAGGT CAGACGACGT 
GGTATCCGTT GA
 
Protein sequence
MQPELLRAGA SLSDCYRCGA ALSDGARCDA AEAALAFQIY VDENIGRWPL YGSSPLDFRD 
WLTVARTLVS FAQAAVRRHS AAAERFFESL GIPLESLQPI PLGLPLEYLS PAERSVLLSI 
VWVIMSAGPQ RFIEAARHES LPASTLHLPT SGSPPVLLDL VAALQSPRHH LVSGVDREHP 
SSPAQTLRMW LRLKRKVRRR GIR