Gene PSPTO_0051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0051 
Symbol 
ID1181659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp71041 
End bp71484 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content53% 
IMG OID637391429 
Producthypothetical protein 
Protein accessionNP_789911 
Protein GI28867292 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2948] Type IV secretory pathway, VirB10 components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAGGTA AAAAACTCGT TTGGGTCACT GTGGTGACTC ACGTATTGAT TTTTGCAGGT 
TGGGCGCAGG CTCAACAGCC GGCGGCAGTC GCTCAGCGCC CCGTAAGCGT ACCGTATGAG
GTAACTGAAG GGACGTTCCT CAATCTGACG CTGGAGCGTG TGGACCCGAA CTATGTTGCG
GCGATGGTGT ACGAGAATGT TTACGACGAC TACGAGAACG TGGCAATCGC ACGAGGTAGC
CGCTTGTTTG GACGTCTGAT CAACAAGATC AACGACTCAC ACGATGTGTA TTTCACACAG
CTACAGCTCA GCACCGGGCA AACGCTTAGT CTTGATCCTC CACTACAAGC CACTTCCCCA
TTGGGCTCTG CAGGCATCAC TGACTTCAAG CCAGCTGCCA TTGCTGGAAC CATCTGGCGA
CGAGATCAGG TCATGCCCCA TTAA
 
Protein sequence
MVGKKLVWVT VVTHVLIFAG WAQAQQPAAV AQRPVSVPYE VTEGTFLNLT LERVDPNYVA 
AMVYENVYDD YENVAIARGS RLFGRLINKI NDSHDVYFTQ LQLSTGQTLS LDPPLQATSP
LGSAGITDFK PAAIAGTIWR RDQVMPH