Gene PSPTO_0049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0049 
Symbol 
ID1181657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp68863 
End bp69606 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content50% 
IMG OID637391427 
Producthypothetical protein 
Protein accessionNP_789909 
Protein GI28867290 
COG category[S] Function unknown 
COG ID[COG4422] Bacteriophage protein gp37 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACCC AGACGAGCAT TGAATGGACT GAAATGACTT GGAACCCTAT TGTTGGGTGT 
ACCAAGGTAT CGCCGGGCTG CAAGCATTGT TATGCAGAAA ACATGGCTCA TCGTTTGCAA
GCGATGGGTA CGCCGGGTTA CGAGAATGGA TTTAAACTTA GCCTGCGCCC GGAAAAACTG
CGAGAACCAC TTCAGCGCAA AAAGCCGACT ATTTATTTTG TAAATTCGAT GTCTGACCTA
TTTCATGAAA AAGTCCCTGA TCACTATATC GATCAGGTCT TTGAGGTAAT TCGCGAAGCA
ACGCAACATA CCTTCCAAAT TCTGACAAAA CGGGCGGAGA GACTCGCAGA CTACTTTAGC
AAGCGCACAC CACCGACCAA TGCCTGGCTG GGCGTCTCGG TTGAGGACAA GGCATACGGT
GTTCCTCGTA TTGATTGCCT GCGCCGGGTA AATGCAACAA TCAGGTTTCT CTCGGCAGAA
CCTCTTCTGG AGGATTTAGG CGAGATTGAT CTGACCGATA TCCACTGGGT GATTGTCGGT
GGTGAGTCAG GTAACAAGGC ACGCCCAATG CAGCAGGAAT GGGTCGATAA CATTCATCGC
CAGTGCGACG TATCGGGCTC GGCCTTCTTC TTCAAACAAT GGGGAGGCTG GGGGGCAGAT
GGCGTCAAAC GCTCGAAGAA AGCCAATGGG CGACTGTTGA ACGGTCAAAC CTGGGATGAG
ATACCTCTTT TAAATTTAGC CTGA
 
Protein sequence
MSTQTSIEWT EMTWNPIVGC TKVSPGCKHC YAENMAHRLQ AMGTPGYENG FKLSLRPEKL 
REPLQRKKPT IYFVNSMSDL FHEKVPDHYI DQVFEVIREA TQHTFQILTK RAERLADYFS
KRTPPTNAWL GVSVEDKAYG VPRIDCLRRV NATIRFLSAE PLLEDLGEID LTDIHWVIVG
GESGNKARPM QQEWVDNIHR QCDVSGSAFF FKQWGGWGAD GVKRSKKANG RLLNGQTWDE
IPLLNLA