Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0049 |
Symbol | |
ID | 1181657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 68863 |
End bp | 69606 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637391427 |
Product | hypothetical protein |
Protein accession | NP_789909 |
Protein GI | 28867290 |
COG category | [S] Function unknown |
COG ID | [COG4422] Bacteriophage protein gp37 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTACCC AGACGAGCAT TGAATGGACT GAAATGACTT GGAACCCTAT TGTTGGGTGT ACCAAGGTAT CGCCGGGCTG CAAGCATTGT TATGCAGAAA ACATGGCTCA TCGTTTGCAA GCGATGGGTA CGCCGGGTTA CGAGAATGGA TTTAAACTTA GCCTGCGCCC GGAAAAACTG CGAGAACCAC TTCAGCGCAA AAAGCCGACT ATTTATTTTG TAAATTCGAT GTCTGACCTA TTTCATGAAA AAGTCCCTGA TCACTATATC GATCAGGTCT TTGAGGTAAT TCGCGAAGCA ACGCAACATA CCTTCCAAAT TCTGACAAAA CGGGCGGAGA GACTCGCAGA CTACTTTAGC AAGCGCACAC CACCGACCAA TGCCTGGCTG GGCGTCTCGG TTGAGGACAA GGCATACGGT GTTCCTCGTA TTGATTGCCT GCGCCGGGTA AATGCAACAA TCAGGTTTCT CTCGGCAGAA CCTCTTCTGG AGGATTTAGG CGAGATTGAT CTGACCGATA TCCACTGGGT GATTGTCGGT GGTGAGTCAG GTAACAAGGC ACGCCCAATG CAGCAGGAAT GGGTCGATAA CATTCATCGC CAGTGCGACG TATCGGGCTC GGCCTTCTTC TTCAAACAAT GGGGAGGCTG GGGGGCAGAT GGCGTCAAAC GCTCGAAGAA AGCCAATGGG CGACTGTTGA ACGGTCAAAC CTGGGATGAG ATACCTCTTT TAAATTTAGC CTGA
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Protein sequence | MSTQTSIEWT EMTWNPIVGC TKVSPGCKHC YAENMAHRLQ AMGTPGYENG FKLSLRPEKL REPLQRKKPT IYFVNSMSDL FHEKVPDHYI DQVFEVIREA TQHTFQILTK RAERLADYFS KRTPPTNAWL GVSVEDKAYG VPRIDCLRRV NATIRFLSAE PLLEDLGEID LTDIHWVIVG GESGNKARPM QQEWVDNIHR QCDVSGSAFF FKQWGGWGAD GVKRSKKANG RLLNGQTWDE IPLLNLA
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