| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0043 |
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| Symbol | |
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| ID | 1181651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 58344 |
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| End bp | 59906 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637391421 |
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| Product | cytidine/deoxycytidylate deaminase family protein |
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| Protein accession | NP_789903 |
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| Protein GI | 28867284 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG2131] Deoxycytidylate deaminase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0728116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGCTC CGGATTTTCG TCTCATAGCA TCGGCTAACA GTAATAAAGG CGGGCATTTC
GACGACATCG GTGCAATCGG TAAAACGATC ACTCCAGAGA TTGTTATCGC GTTGTGCGGA
CCGATGGGAA CACCGTTGCA CGACGTGGCA AAAACATTCC AGGAACTGCT ACTTGGCACC
GATTACAACT ACGAAAAAGT AAACATCATC AGGCTGAGTG ACGAAATCCG TAAGCAAAAG
TCGCTGACGG GTGAGAAGTC GATCCTCAAG CTAATTGAAG CAGGTAACAA ACTTCGCGAA
GAACATGGAA ACGAGATCTT GGCGCGCTTC GCCATTCGTC GAATTACCCT TGAACGAGAA
GAAGCGCAGC AGGCTGCTGA AAAAATTCAA GAGCCTGACC TTTTCGACAC TTCGGGTTCG
CCGCCGACTC CAAAGATCAC TGTCCGCTAT TGCCACATTA TCGACTCAAT TAAACATATC
GACGAACTCC GCCTGCTGCG CTCCGTCTAC GGGGACATGC TGCATGTGGT AGGCGTCTAT
TCCCCGATTG AGCTACGAAT CACCAGGCTA GAACGCTACA AAGGCCAAGG CGATCAGATT
CACGATCTGA TCGATCGAGA CTCCGGCGAA GAGATGGATC ACGGGCAACG AGTCGAAGAC
ACCTTTCCGC AAGCAGACTT CTTCTTACGC GTAGAAAAAA CGACCGACAC GCATCGCAAA
GGACGCGTTA AACGATTCCT TGATCTCATT TTGGGAACAG TCATCGCGAC GCCAACCCTC
AACGAGCGCG CTATGTATGC AGCATTTTCC GCCGCACGAA ATTCCGCATG CCTCTCCCGT
CAGGTCGGCG CTGCAATTAC AAGCGAGGAA GGGGAAATAT TAGCAACGGG GTGGAATGAC
GTACCCAAAG CCTTCGGCGG GCTCTACCAG ACAGAGTCTT ATGGAAGCTC CCCAGATGAA
GATCGACGCT GCTGGAACCT CGAAGGCGGT CGATGCTCCA ACGATCAGGA GAAAGAGGTC
ATCTCGAACG CTATCGTCGA TTTGCTATCG AGCGAAGGGC TCATCGATGA AGCAAACCGC
GAAAAGGTCT ACAAGGCAAT ACGGAAGAAA TCCCAACTCA AGAGCCTGAT TGAGTTTTCT
CGTGCTGTGC ACGCCGAGAT GCATGCTTTA CTCAGTGCTG GAAGCACCGA TGGCGGGAAA
ATCCGTGATG GGAAACTATT TGTGACCACG TATCCATGTC ATTCATGTGC GCGGCACATC
GTCGCAGCTG GTGTACGTGA GGTTTACTTT TTGGAGCCCT ACCGGAAGAG CCTTGCGACG
AAGCTTCACG AGGATGCTAT AACTGAAAAT GAGAATGAAA CGGATAAGGT GAGAGTGATG
CCGTTCGATG GCGTAGCGCC CTCACGATTT CTTCGCTTCT TCTCTGCTCA CCCCAAAGGT
CGGAAAAACT CGGAGGGCGT TATGCAAACC AGGGAGGCTC ATCCCGTCGC TTTTGTCACA
ATGGAAGCTA TTCCGACTCT TGAATCTCTC ATCGTTCAGG GTTTATCCTC GCGCGGCATT
TGA
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| Protein sequence | MAAPDFRLIA SANSNKGGHF DDIGAIGKTI TPEIVIALCG PMGTPLHDVA KTFQELLLGT
DYNYEKVNII RLSDEIRKQK SLTGEKSILK LIEAGNKLRE EHGNEILARF AIRRITLERE
EAQQAAEKIQ EPDLFDTSGS PPTPKITVRY CHIIDSIKHI DELRLLRSVY GDMLHVVGVY
SPIELRITRL ERYKGQGDQI HDLIDRDSGE EMDHGQRVED TFPQADFFLR VEKTTDTHRK
GRVKRFLDLI LGTVIATPTL NERAMYAAFS AARNSACLSR QVGAAITSEE GEILATGWND
VPKAFGGLYQ TESYGSSPDE DRRCWNLEGG RCSNDQEKEV ISNAIVDLLS SEGLIDEANR
EKVYKAIRKK SQLKSLIEFS RAVHAEMHAL LSAGSTDGGK IRDGKLFVTT YPCHSCARHI
VAAGVREVYF LEPYRKSLAT KLHEDAITEN ENETDKVRVM PFDGVAPSRF LRFFSAHPKG
RKNSEGVMQT REAHPVAFVT MEAIPTLESL IVQGLSSRGI
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