| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0038 |
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| Symbol | |
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| ID | 1181646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 52403 |
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| End bp | 54493 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637391417 |
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| Product | hypothetical protein |
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| Protein accession | NP_789899 |
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| Protein GI | 28867280 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1479] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACCGA GCAAAACAAC GGTTACGGGC CTGTTCAACA GTCCACATCA ATATCAGATC
CCCATTTTCC AACGGGGATA TGTTTGGACG CTGGAAAAGC AGGTCGGCCC TTTGTGGGCC
GACATTCAAG ATCGAGCAGA TGCCGTTCTT GAGCAGCATT CGCTGTCCTC AACAGGCACG
AACGCTGGGT TGAAGCCGTT GCAGAAGCAT TTTTTGGGTT CCATTGTCAT GACTCCAGTG
CCCAACAGCT TTGGTAGGGT TGCCGCCTTT GAAGTCATTG ATGGGCAGCA GCGCTCTACC
ACGCTACAGC TCTTGTTACT GGCTTTCCGC CAGGCTGCGC TTGAACTACC GGGTAGCCCT
ATACCGCAAA TGCTCAACGG CCTCGTGCGT AACCCAGGCC CATACCAGTG TGCGGAAGAT
CACTACAAAA TTTGGCCAAC GCAGGCCGGT CAGGATGAAA TGCGTCGCTT GAGCGATGCT
GCTACAGATG CTCAGGTCAT TTGTAATGGG TACCCGGTAC GCGATGGCCG TGTCCGCATT
GAACGGCCTT TGATGATTCA GACCTATCTG TATCTTTACC ACGCCTGCTT GGCTTACATG
AGAGGCGTTG ACCTCACCGA TGCGGTGAAT CCGGCTTCAG ATGCCACATT AGGCGACACG
CTGATTGCTG ATATTCGCCG TCACAATGAT GTTCTGCCGT TGCAAGCTGG TTTGCCTTTG
ATATCCAGTC GAGGTGAGGC GCTATACATG GCGCTGTCCG ACCTCATGCA AATAATGACG
CTGACTTTGG AAGCCGAAGA CGACCCTCAA ATCATCTTCG AAACCCTCAA TGCCCGTGGC
GAGCCTTTGC TTGCATCGGA TCTGGTACGC AATTATGTTT TCCTGGAAGC GGCGCGTCAG
GGGAAGGATG TGCCAACGCT GTATGAAAGT TATTGGAGTC CATTTGATCT GGTAGCAAAC
TCCGGCAAAG GCGTTTCGAC CAACGCCTAC TGGCGAGAGA AAGAGCGTCA AGGCCGTCTG
ACCTATCCGC GAATTGATCT GTTTTTCTAT AACTACGCCA CTCTCCGCAG CCAGGAAGTA
ACCCTGGCCA GCCATGTTTT CCAGTCATTC AAAACCTGGT GGCAAAAGCA GCCGCGTGAT
CTGGAGGCGG AACTGGGGCG GCTTGTTGCA TCCAGCACAC ACTTCAAGGA GCTGGTGTCG
CCGGAAGGCA CTGGGTACCT CGCTGAGTTT GCACGGCTAG TTAGGTCGTT GGACGTCAGT
ACGGTAACTC CGGTCTATCT CGCGTTGCGT GAACGTCTTG ATAAAGACAG TACAGAGCTG
AAGCAGGCGC TCAGTGACCT GGCTTCCTAT TTGACTCGGC GTACTGTCTG CGGATCGACC
ACTAAGGGTT ACAACCGCTT CTTCATGCGT GTCCTTCAGT CGGTTTCAGC GGCATCGATT
GATCCGCACC TGGCACTTAG GGAAACGCTT TTGGCCGCAA CGGGCACCAG TGAAATCTGG
CCGGACGACG CTTCATTCAG TGACAAGTGG TGCCATAGAG CGGTGTACAA GGAGCTTAGG
CCCGTCAAAA CGTGCGGCGT CTTGCGGGCG TTGGAATATG CAGCCCGTGG CTCCCAGCAA
GCAAGCAACC ATGTGCCTGC CCAGTCTGAT TTGACTGTCG AGCATGTACT GCCACAAAGC
TGGAAGAACC TGTCTTATTA CCAGATTGAA AGCATGACCG AAGGACAGAG TCAGCTCAGA
GATATCGCTG TACATGGTTT TGGAAACTTG ACGCTGCTGA CTCAACCGCT GAACAGCTCA
ATCAGCAATG GCCCCTTTAC CGACACCATA GGTGTCGATG GTGAACTGGT TCTGGGCAAA
CGATCTCGAC TAGGTCAAAG CGCTCTGCTG TTGAATACCT ATTTCCACCA GTCAGCGCTT
GCATCATGGG ACGACGTAGC CATCGAAAAT CGTGCGAAAG CCCTGCTTAA AGCCGCGTTA
CTTGTATGGC CGAAGCCCGT CGACAGTACA GCTTCACCTG TCGCGGTAGC ATCGGCGATC
TCAAGGTGTC CTGATCGGAT CGTAAGATTG TTCGATAAGG AGGGAGTGTG A
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| Protein sequence | MQPSKTTVTG LFNSPHQYQI PIFQRGYVWT LEKQVGPLWA DIQDRADAVL EQHSLSSTGT
NAGLKPLQKH FLGSIVMTPV PNSFGRVAAF EVIDGQQRST TLQLLLLAFR QAALELPGSP
IPQMLNGLVR NPGPYQCAED HYKIWPTQAG QDEMRRLSDA ATDAQVICNG YPVRDGRVRI
ERPLMIQTYL YLYHACLAYM RGVDLTDAVN PASDATLGDT LIADIRRHND VLPLQAGLPL
ISSRGEALYM ALSDLMQIMT LTLEAEDDPQ IIFETLNARG EPLLASDLVR NYVFLEAARQ
GKDVPTLYES YWSPFDLVAN SGKGVSTNAY WREKERQGRL TYPRIDLFFY NYATLRSQEV
TLASHVFQSF KTWWQKQPRD LEAELGRLVA SSTHFKELVS PEGTGYLAEF ARLVRSLDVS
TVTPVYLALR ERLDKDSTEL KQALSDLASY LTRRTVCGST TKGYNRFFMR VLQSVSAASI
DPHLALRETL LAATGTSEIW PDDASFSDKW CHRAVYKELR PVKTCGVLRA LEYAARGSQQ
ASNHVPAQSD LTVEHVLPQS WKNLSYYQIE SMTEGQSQLR DIAVHGFGNL TLLTQPLNSS
ISNGPFTDTI GVDGELVLGK RSRLGQSALL LNTYFHQSAL ASWDDVAIEN RAKALLKAAL
LVWPKPVDST ASPVAVASAI SRCPDRIVRL FDKEGV
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