| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0036 |
|---|
| Symbol | |
|---|
| ID | 1181644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 46754 |
|---|
| End bp | 47113 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637391415 |
|---|
| Product | ISPsy5, Orf1 |
|---|
| Protein accession | NP_789897 |
|---|
| Protein GI | 28867278 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGAC CCGACGCCAA AGTCGAGAAA GTCTACCTCT ATCCCAAACC CGTGGATTTC
AGAAAATCCA TCGATGGCTT AGCTGCTTTG GTCGAGTTGG ATATTAAAGT GGCGGTCTTT
GATCCGGTGC TCTTTGTCTT TCTCAACAAA TCCCGGAATC GAGTGAAGAT TTTGTATTGG
GAGCGTAACG GCTTCTGCCT TTGGCTCAAG CGTCTCGAGT CCGAGCGTTT CAAAATCTCG
CCAGATGATG TCGACGAAGC CATTGTGCTG ACGGTTCAGG AATTGAATTG GCTGCTGGAT
GGATTTGATC TGTGGCGCAA CCGTCCTCAT AAGATTTTGA CTCCAAGGTT TGTTGCCTGA
|
|---|
| Protein sequence | MMRPDAKVEK VYLYPKPVDF RKSIDGLAAL VELDIKVAVF DPVLFVFLNK SRNRVKILYW
ERNGFCLWLK RLESERFKIS PDDVDEAIVL TVQELNWLLD GFDLWRNRPH KILTPRFVA
|
|---|
| |