Gene PSPTO_0035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0035 
Symbol 
ID1181643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp45183 
End bp46736 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content56% 
IMG OID637391414 
ProductISPsy5, transposase 
Protein accessionNP_789896 
Protein GI28867277 
COG category[L] Replication, recombination and repair 
COG ID[COG3436] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.701861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACCAT TGCCCGACAA CCTTCCTGAC GATCCCGTAT TGCTCAAACA GATGCTGCTT 
GAGAGCTACG AAGCACGCTC GCGCGAACAG GAAGTTAAAG ACGCCTACGC CACTCACATC
GTTGATCTCA AAGAGCAGAT CAAGCTGCTG CGTGACCGTA TTTTTGGTCG AAAGTCCGAA
CAAACCGTCG AGCCTAATAC CCCTCAACTT GCCTTGTTCA ATGAACCTGA AAGCGAGCCT
ATGCTCCCGG TCGGCGATGC TGATGAGGAA GTAGTTGCTC CTGCGCCACG CCGTGGCAAG
CGCAAGCCAC TGTCGGCTGA TCTGCCGCGC ATTGAAGTCA TCCACGAGCT GCCCGAACAC
GAACTGACCT GTGCCTGCGG TTGCCGCAAG CATGTCGTCA GCGAGGAAAC CAGCGAGCAA
CTGGATATCG TGCCGATGCA GATTCGGGTG ATCAAACACA TCCGCAAAGT CTACGGCTGT
CGTGGCTGTG AGTCGGCACC GGTCACAGCC GGCAAGCCTG CGCAGTTGAT TGAAAAGAGC
ATGGCCAGCC CCAGCGTGTT GGCCATGCTG CTGACCACCA AGTATGTCGA CGGCTTGCCG
CTGCATCGTT TTGAAACGGT GCTAAGCCGA CATGGCATAG AAATCCCGCG TCAAACGTTG
GCCCGCTGGA TTATCCAGTG CGGCGAACAT TTGCAGCCGC TGTTAAATCT GATGCGTGAT
CGATTGCTGG AAAGCCCGGT CATCCACTGT GACGAAACCC GCGTTCAGGT ACTGAAAGAA
CCAGATCGAG ACCCGACCAG CCAATCCTGG ATGTGGGTAC AGGCCAGCGG GCCTCCAGAT
CATAAAGTCG TATTGTTCGA CTACACTTCC AGCCGCGCGC AGGACGTACC GTTACGGCTG
CTGGAAAGTT ATCGCGGCTA TGTGATGACT GATGATTACG CGGGCTATAA CGCGCTGGCG
TTACAACCGG GCGTGGAGCG CTTGGCGTGT ATGGCCCATG CGCGGCGCAA ATTTGTCGAA
GCACAAAAAG TGCAACCTAA GGGCAAGACC GGGCGTGCCG ATATCGCGCT GACGATGATC
AATAAGCTGT ACGGTATCGA GCGCGAATTG AAAGACGGCA GCGACGAACA GCGCTTTACC
GGTCGGCAGG AGAAAAGCCT GCCAATCTTG GCTCAGTTGA AAAGCTGGCT GGATAAAACT
CAGTCCCACG TGACGCCGCA AAGCGTGCTG GGCAAGGCAG TTGGTTATCT GGCGAATAAC
TGGAGTCGGC TGAAGCGTTA CGTGGAAGCC GGCTTTTTAC CGATCGACAA CAACCCGGCA
GAGCGCGCAA TAAAGCCGTT TGTTATTGGG CGCAAAGCCT GGCTGTTCAG CGACACGCCT
AAAGGCGCCA CCGCCAGTGC ACAGATCTAT AGCTTGGTCG AGACCGCCAA GGTCAACGGC
CAGGAGCCCT ATACGTGGCT GCGCCACGTA CTGGAGAGGT TGCCACTTGC GCAGTCGGTG
GCCGACTATG AGGCGTTGCT GCCGTGGAAC TGCTCACCGG AAATGCCAAG ATAA
 
Protein sequence
MRPLPDNLPD DPVLLKQMLL ESYEARSREQ EVKDAYATHI VDLKEQIKLL RDRIFGRKSE 
QTVEPNTPQL ALFNEPESEP MLPVGDADEE VVAPAPRRGK RKPLSADLPR IEVIHELPEH
ELTCACGCRK HVVSEETSEQ LDIVPMQIRV IKHIRKVYGC RGCESAPVTA GKPAQLIEKS
MASPSVLAML LTTKYVDGLP LHRFETVLSR HGIEIPRQTL ARWIIQCGEH LQPLLNLMRD
RLLESPVIHC DETRVQVLKE PDRDPTSQSW MWVQASGPPD HKVVLFDYTS SRAQDVPLRL
LESYRGYVMT DDYAGYNALA LQPGVERLAC MAHARRKFVE AQKVQPKGKT GRADIALTMI
NKLYGIEREL KDGSDEQRFT GRQEKSLPIL AQLKSWLDKT QSHVTPQSVL GKAVGYLANN
WSRLKRYVEA GFLPIDNNPA ERAIKPFVIG RKAWLFSDTP KGATASAQIY SLVETAKVNG
QEPYTWLRHV LERLPLAQSV ADYEALLPWN CSPEMPR