| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0034 |
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| Symbol | |
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| ID | 1181642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 42754 |
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| End bp | 44310 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637391413 |
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| Product | recombinase, putative |
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| Protein accession | NP_789895 |
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| Protein GI | 28867276 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAAAAA GACTAGAAGA CTACTCCGAC GGCTTGATAG CGGCTGCGGA ATACGTTCGC
ATGTCGACTG ATCACCAGCG CTATTCCACC GAAAACCAAT CGGCTGCTAT TCATGCTTAC
GCCCTGAGCC ATGGCATGGA CATTGTAAAA ACCTATCGTG ATGAAGGCAA AAGCGGCTTA
GACATCGGGG GCCGCGACGC TCTGCGTAGG TTGCTCGATG ACGTCCAGGC GGGAAATGTT
CAGTTCCAAA TTATTCTGGT TTATGACGTC AGTCGCTGGG GGCGCTTTCA GAACACAGAC
GAGAGCGCTC ATTATGAATA CCTCTGTACC AGCTCCGGCA TCCAGGTGGT GTATTGCGCA
GAGCCCTTCG AGAACGATGG TTCGCCTCTG GCAACGATTT ATAAAGGTAT CAAACGTTCA
ATGGCAGGAG AGTACAGTCG CGAGCTCTCT CAAAAAGTTT TCGCTGGCCA ATGCCGCCTT
GTGGAAAAGG GTTTCCATCA GGGCGGGCCC GCAGGGTATG GACTGCGCCG CGCTCTGATT
GATGAGAAAA ATGAGTTCAA GGCAGAACTG TCGCGGGGGC AGCAAAAAAG CATTCAGACG
GACAGGGTCA TCCTAATTCC TGGGCCTGAA GCTGAGATAG AAATCGTTCA ACACATCTAT
CACCGATTCA TCCACAACGG GATGAACGAA CGCGAAATTG CTAACGCACT TAATGCTGAC
GGTGTGCTCA CCGACTTTGA TCGTCCTTGG AGCCGTAGCA GCGTCCACGA GGTGCTGACC
AATGAGAAAT ATATTGGCAA CAACGTATAC AACAAAACAT CATCCAAGCT ACGCAAACGT
AGCAGCCGCA ACCCGCCCGA CAAGTGGATA CGCTGTGATG GCGCATTTCA AGGAATTGTT
TCACTAGAGG TTTTTACCTG CGCTCGCGAA ATCATCCTGC AGCGTTCACA CCGCCTAGAT
GATACACAAA TGCTAGAACT GCTCCGCGCC TTACTTCAAC AGGCAGGCTC ATTATCTGGG
ATGCTCATTG ACGAGCAGGA CAACATGCCC TCCAGCACTG TTTACATAAG TCGTTTTGGT
GGACTTTTAC GCGCCTATAC CCTCATCGGT TACGCACCAG ACCGAGATTA TCGATATATG
GATATCAATC GGTCTCTACG ACAACTACAT CCACAGGTTT TTGAAGACGT AATAAAACAC
TTGGAAAACG CTGGAGCGAG TGTAGAAATC AGTGCTCAGA ATGACGTATT AACAGTTAAC
GGTGAGTGGA CGGCATCTGT AGTTATCGCC CGCTGTCACT CAACTCCGGC AGGCACTCTT
CGATGGAAAC TGAGATTCGA CATTAGCCTG GCACCAGATA TCACCATTGC TGTGCGCATG
GAGCGAGCAA ACCTTCAAGT CCGGGACTAT TACCTCGTTC CACTTATAGA CATGGGCGCC
TGGCCACAGA AAATGGCAGA AGAAAACAGC CCTCTGATAG ACAGCTACTG TTTCCAAACT
CTGGATGTAC TTGATGGGCT TGCTGCCCGC TGCTCTCTGA AGGAGGCTTG TCAATGA
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| Protein sequence | MRKRLEDYSD GLIAAAEYVR MSTDHQRYST ENQSAAIHAY ALSHGMDIVK TYRDEGKSGL
DIGGRDALRR LLDDVQAGNV QFQIILVYDV SRWGRFQNTD ESAHYEYLCT SSGIQVVYCA
EPFENDGSPL ATIYKGIKRS MAGEYSRELS QKVFAGQCRL VEKGFHQGGP AGYGLRRALI
DEKNEFKAEL SRGQQKSIQT DRVILIPGPE AEIEIVQHIY HRFIHNGMNE REIANALNAD
GVLTDFDRPW SRSSVHEVLT NEKYIGNNVY NKTSSKLRKR SSRNPPDKWI RCDGAFQGIV
SLEVFTCARE IILQRSHRLD DTQMLELLRA LLQQAGSLSG MLIDEQDNMP SSTVYISRFG
GLLRAYTLIG YAPDRDYRYM DINRSLRQLH PQVFEDVIKH LENAGASVEI SAQNDVLTVN
GEWTASVVIA RCHSTPAGTL RWKLRFDISL APDITIAVRM ERANLQVRDY YLVPLIDMGA
WPQKMAEENS PLIDSYCFQT LDVLDGLAAR CSLKEACQ
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