Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0026 |
Symbol | |
ID | 1181634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 32022 |
End bp | 33068 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637391405 |
Product | hypothetical protein |
Protein accession | NP_789887 |
Protein GI | 28867268 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTAGAA AAGTGGACAC CACCTGGTAC GGCATCTATT TGGAAGCAAT CGCCTTCGAG AACCTCTCGG GAGATAAGTC CGTAGGCACA CCAGAGTTGG CAGATCATCT GGGTGTGAAG CCAAAAACAC TTGCACGAAT AAGGTCTGCA GGCCGCTTCA TCCATGAGGT GCTACCTGGG GTAAAGCCAG AGCAAATTCA GTGCGGTTAC GCCTCGTTAG AGCTGTTATC TAAGTTATGG GGAGCGGATC CCTCGGGCGC ACAGTCTCGA TTGGAAAGTG TCCTGGCCAA CAGGACTAAG CTGCCTGAGC TAGAAGAAGC TATTCGTCGG CTCAAGCTTG GCGAAAACAA AAGCTCCACA GAAAGCAACC TAGTCGGGCC GTCCCAGCTT GGGTTTATGG CACGAATGGA TGTCTGGATA GCATCGTCAG ATTTGGTGCA TTTCGATTCG TATCGGGGTA CAGCGTTTAG ACTCAAACCA TGCCTCGGCT CCTGTCCTGG ATATCTCATC AACACAGAAA ACGGTCAACC GAGCGCCCTC GTCCTTTGCA AACAGGGGAG CGGCTGGCGG GATCCTGCCG GCGTCGCTAG GGAGCTGTAT GAGCATGCAA TAGCTCGCAG GCACACAGCC CCAGCGATCT GGTATGTCTT TGAAAAAGAC AGTGCAGTGC TTCAGCACCT CGCAGAGCTA AGCATCTGGT GGGGTGGCTC GCCTACTAGT GACGATCCAT GGTTACTCTT GGCCTATCTG ACCGAATCAG GGAAGCTTGA GGTGCTTTTT GAGGAATACT TCTACAACCT GATAGGCAGC ATGACAAAGG GCGAAGGTGC GCTTCGGCCA AATGATCTGA TCGCCACTGG GGAAGCTATG GATGGCAGCA AGGCATGCAT CACAATTCCT TTACGGAACA TCCAGCCTAT ATCTGCAGCG ACGAAACATC GCCCGTACTC CGAAGTACTT CGAGAGCGCT TACTGGCGAT TGCCGGGCAA GGTCATGCAA CGTCGGATCA AATTGACCGA TTGGCTGCTA TTGACCTAGG TCTCTGA
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Protein sequence | MGRKVDTTWY GIYLEAIAFE NLSGDKSVGT PELADHLGVK PKTLARIRSA GRFIHEVLPG VKPEQIQCGY ASLELLSKLW GADPSGAQSR LESVLANRTK LPELEEAIRR LKLGENKSST ESNLVGPSQL GFMARMDVWI ASSDLVHFDS YRGTAFRLKP CLGSCPGYLI NTENGQPSAL VLCKQGSGWR DPAGVARELY EHAIARRHTA PAIWYVFEKD SAVLQHLAEL SIWWGGSPTS DDPWLLLAYL TESGKLEVLF EEYFYNLIGS MTKGEGALRP NDLIATGEAM DGSKACITIP LRNIQPISAA TKHRPYSEVL RERLLAIAGQ GHATSDQIDR LAAIDLGL
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