Gene PSPTO_0026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0026 
Symbol 
ID1181634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp32022 
End bp33068 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content53% 
IMG OID637391405 
Producthypothetical protein 
Protein accessionNP_789887 
Protein GI28867268 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTAGAA AAGTGGACAC CACCTGGTAC GGCATCTATT TGGAAGCAAT CGCCTTCGAG 
AACCTCTCGG GAGATAAGTC CGTAGGCACA CCAGAGTTGG CAGATCATCT GGGTGTGAAG
CCAAAAACAC TTGCACGAAT AAGGTCTGCA GGCCGCTTCA TCCATGAGGT GCTACCTGGG
GTAAAGCCAG AGCAAATTCA GTGCGGTTAC GCCTCGTTAG AGCTGTTATC TAAGTTATGG
GGAGCGGATC CCTCGGGCGC ACAGTCTCGA TTGGAAAGTG TCCTGGCCAA CAGGACTAAG
CTGCCTGAGC TAGAAGAAGC TATTCGTCGG CTCAAGCTTG GCGAAAACAA AAGCTCCACA
GAAAGCAACC TAGTCGGGCC GTCCCAGCTT GGGTTTATGG CACGAATGGA TGTCTGGATA
GCATCGTCAG ATTTGGTGCA TTTCGATTCG TATCGGGGTA CAGCGTTTAG ACTCAAACCA
TGCCTCGGCT CCTGTCCTGG ATATCTCATC AACACAGAAA ACGGTCAACC GAGCGCCCTC
GTCCTTTGCA AACAGGGGAG CGGCTGGCGG GATCCTGCCG GCGTCGCTAG GGAGCTGTAT
GAGCATGCAA TAGCTCGCAG GCACACAGCC CCAGCGATCT GGTATGTCTT TGAAAAAGAC
AGTGCAGTGC TTCAGCACCT CGCAGAGCTA AGCATCTGGT GGGGTGGCTC GCCTACTAGT
GACGATCCAT GGTTACTCTT GGCCTATCTG ACCGAATCAG GGAAGCTTGA GGTGCTTTTT
GAGGAATACT TCTACAACCT GATAGGCAGC ATGACAAAGG GCGAAGGTGC GCTTCGGCCA
AATGATCTGA TCGCCACTGG GGAAGCTATG GATGGCAGCA AGGCATGCAT CACAATTCCT
TTACGGAACA TCCAGCCTAT ATCTGCAGCG ACGAAACATC GCCCGTACTC CGAAGTACTT
CGAGAGCGCT TACTGGCGAT TGCCGGGCAA GGTCATGCAA CGTCGGATCA AATTGACCGA
TTGGCTGCTA TTGACCTAGG TCTCTGA
 
Protein sequence
MGRKVDTTWY GIYLEAIAFE NLSGDKSVGT PELADHLGVK PKTLARIRSA GRFIHEVLPG 
VKPEQIQCGY ASLELLSKLW GADPSGAQSR LESVLANRTK LPELEEAIRR LKLGENKSST
ESNLVGPSQL GFMARMDVWI ASSDLVHFDS YRGTAFRLKP CLGSCPGYLI NTENGQPSAL
VLCKQGSGWR DPAGVARELY EHAIARRHTA PAIWYVFEKD SAVLQHLAEL SIWWGGSPTS
DDPWLLLAYL TESGKLEVLF EEYFYNLIGS MTKGEGALRP NDLIATGEAM DGSKACITIP
LRNIQPISAA TKHRPYSEVL RERLLAIAGQ GHATSDQIDR LAAIDLGL