| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0017 |
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| Symbol | |
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| ID | 1181625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 20738 |
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| End bp | 23143 |
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| Gene Length | 2406 bp |
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| Protein Length | 801 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637391396 |
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| Product | helicase/SNF2 family domain protein |
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| Protein accession | NP_789878 |
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| Protein GI | 28867259 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATGT TGGCTCATGC CATTAAGGTG TGGAATGAAA ACACTGGTGC TCTTTCTCAC
CTGGAAATTG AGCCGCTGCC TCACCAGATT CACCTGGTGC ACCACATCCT GGCATCCGGC
AACTTCAACT GGTTGATTGC GGATGATGTG GGATTGGGTA AGACCATCGA GACTGGAATG
TTGCTGCACG CCCTGCAGCA ACGAGACCTG GCCAAACGCA TCCTGCTGAT CACGCCCGCA
GGCCTGACCA AACAATGGCA GGAGGAGCTG TACCACAAGT TCAAACTGGA AGACTTCGAG
ATCTATGGGG AAGACTTTTT CATCAATGAA CCCCGCCAAT GGAAGATGCA CGACTGCGTC
ATAGGCTCCA TGGATCGTCT AAAACAAGTC GACCACCTGG AAAGCCTGCT CCAGGCAGAG
CCATGGGATC TGGTGATCTT TGACGAAGGG CATCGACTCA GCCGCCGCCA GTACGGACAG
AAGCTGGACA GCTCTGAACG CTATGACTTG GCAAAGAACC TACGCAGCCA AACCAAACAC
ATGCTGTTAT TGAGCGCGAC TCCTCATCAA GGCATGCAGG ACAAGTTCGT GGCACTGCTA
GAGCTACTAC GCCCTGAGCG TCGCACCGAG CTGATGATGC TCAACCTGAA TCCAGAAATT
CTGCATGACA TGGTGTTCCG CAACCACAAA GCCGACGTCA CCGATGCGGA AGGGAACTTC
ATCTTCCAGG GCAAAATAAC CAGTGCCTTG CAGGTGCCCA GCAGCCATGA ATCCATCGAG
TTCGACAAAA CGCTTCAAGC CTATCTGCGC AAAGGCTATG ACGCAGGTGA AGCGCTAGGC
CGTACCGGTA ACGCCATTGG ATTCGTCATG ACGGTTTATC GCAAGCTGGC CGCCTCCAGC
GCAGCAGCCA TTCACCGGGC ACTGTCTAAT CGTCTTCAGA GGCTTCTTGA CGATGAAGCC
AAGGGCACCT CAAAAGACGA ACCCAGCGAT GAACGCTACC TGGGTGAGTG GGAAGAGCAA
TTTACCAGCG ATGCCCGCGA GTTCTTTGCC GGTGAAGTCC AGTTGTTGAA AGATCTTATT
GATGAGGCCG CTGCGCTGAA AGCCAACGAC CTCAAGCTGA AGCGATTCAT CGATGAGATC
ATCGGCAAAA TCCACACAGC TAACCCCGAC GAGAAAGTGC TGATTTTTAC CGAATATCGC
ACCACTCAAA ACTATCTGCG TGATGCCTTG GCCAACCACT ATGGTAGCGA CCAGGTCGAT
CTAATCAATG GCTCCATGCA GCATGCTGAA CGGCGTGAAG CCATCAAGCG CTTTGAAGAG
CAAGGGCGAT TCCTGATCTC GACCGAGGCG GGCGGCGAAG GCATCAACCT CCAGAGTAAG
TGCCACGTCA TGGTCAACTA CGACCTGCCC TGGAACCCCA TGCGTCTCGT CCAACGCATC
GGTCGTTTGT ATCGCTATGG TCAGAAGAAG AAGGTCGTCG TGTTCAACAT CCAGCAAGCT
GACAGTCTGG ATCAGAACAT CGTCGACCTG ATGTATGAGC GGATCGACAG CGTGGTGAAT
GACCTCGCCG AAGTTCAGCA GCATGAATTC AACGATGGCC TGAAAGACGA AATCCTCGGT
CAGGTAGCCG AGTTGATCGA TGTGGAAGAT ATCCTGCAAC AAGCCACAAA ACTCGGAATC
GACCGAACCC GAGAGCGCAT CGATGAAGCG TTAAAGCAGG CACGTACTGC CGCCGCTAAA
CAACGAGAGC TGTTTGCTCA CGCCGCCACC AGTGACCCAA ACGAACTGCG CGACGAGCTA
GAAATCACCG TCGATCACCT TTACAGCTTT GTCCTGGGCA TGTTCGATCA ACTTGGCATA
GAGGTGACAG AACGCAGCCA TAAAGAGCGG CTATTGCGTA TTCGCTTGTC TGATCAAGTG
ATGCGTGAAA TGGGCCTATC ACCCAAAGCC TCACAACGCA TGGACGTTAC CCTGGATCGC
TTGCTGGCCT CCAATCGCCC TGACACCCAT ATGCTCGATC TCAACTCCAA GCTCATGCAG
TACCTACTGG GTAAAGCCTG CGAGTATGAC TTCGGCGGTT TGGCCGCAAT GCTTCAAGCA
CCCGAACTCG GTGAAGGTGC GCTGCTCGGT GCCATGCTGC GCTGGCAAGG CCCACAGGGC
AAACGCATGC GGCAGGAGTT TGTGGCCATT CAGGTTGACG ATGGCAAAGC CAAACTCAAC
CATGCAAAAG TTAGCCAATG GCTAATGAGA CCAGCGGAAT ACAGCGTCCT GAGTCCCGAT
GGCCAAACCT CCAAATTATT GTTCAAGGCC GCAGAGGAGA TGGCCAACCA ACGCCTGGCT
GATGCAAGTA ACCGCTACCT GATACCAGAG AATTTGGACT GGGCTGCCGC CGGCTGGACG
CATTAA
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| Protein sequence | MRMLAHAIKV WNENTGALSH LEIEPLPHQI HLVHHILASG NFNWLIADDV GLGKTIETGM
LLHALQQRDL AKRILLITPA GLTKQWQEEL YHKFKLEDFE IYGEDFFINE PRQWKMHDCV
IGSMDRLKQV DHLESLLQAE PWDLVIFDEG HRLSRRQYGQ KLDSSERYDL AKNLRSQTKH
MLLLSATPHQ GMQDKFVALL ELLRPERRTE LMMLNLNPEI LHDMVFRNHK ADVTDAEGNF
IFQGKITSAL QVPSSHESIE FDKTLQAYLR KGYDAGEALG RTGNAIGFVM TVYRKLAASS
AAAIHRALSN RLQRLLDDEA KGTSKDEPSD ERYLGEWEEQ FTSDAREFFA GEVQLLKDLI
DEAAALKAND LKLKRFIDEI IGKIHTANPD EKVLIFTEYR TTQNYLRDAL ANHYGSDQVD
LINGSMQHAE RREAIKRFEE QGRFLISTEA GGEGINLQSK CHVMVNYDLP WNPMRLVQRI
GRLYRYGQKK KVVVFNIQQA DSLDQNIVDL MYERIDSVVN DLAEVQQHEF NDGLKDEILG
QVAELIDVED ILQQATKLGI DRTRERIDEA LKQARTAAAK QRELFAHAAT SDPNELRDEL
EITVDHLYSF VLGMFDQLGI EVTERSHKER LLRIRLSDQV MREMGLSPKA SQRMDVTLDR
LLASNRPDTH MLDLNSKLMQ YLLGKACEYD FGGLAAMLQA PELGEGALLG AMLRWQGPQG
KRMRQEFVAI QVDDGKAKLN HAKVSQWLMR PAEYSVLSPD GQTSKLLFKA AEEMANQRLA
DASNRYLIPE NLDWAAAGWT H
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