Gene PSPTO_0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0007 
Symbol 
ID1181615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp10179 
End bp11063 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content55% 
IMG OID637391387 
Producthypothetical protein 
Protein accessionNP_789869 
Protein GI28867250 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGAAA TCATCCCCCT GCCCTCAGAT CCTCTGCCTG ACCTTCAGCG CACCGTGCAG 
CGCAAGCTTG GGCGCTGCAT ATTGCAGTCG CAGCAGTACG AGCGGCTGCT GAAGGCCATG
GTGGCCCATG GCGAGTTGAG TGGCCCTCCG GAACGACTTC AGGCGATTCG CGACGAGAAG
GTTGCCTGTG CCGATAAGAA AACTCTGGGT ACCTTGGTGG GGATGCTGAC CGAGAGCTAT
CTGAAACTGC CGGACTTGTC TGATGAGCCA GAGCAAGCGG AGCCAATTGA TCGGGTATGG
GTTAGCTTCC GATGTCAGAT GGAGTTAACC GAAGAACGTT ATGCCGAGAC CAAGGCTGCG
CTGAAGGAGT TGGTCGACCT GCGTAACGAG TTGGTGCACC ACTTCCTTCA GCGCTTCGAC
CTTTGGGGCG TCGATGGCTG TATAGCCGCT GAGTCATATC TCGATGAAAG TTACGAAACC
ATCGACGGCC ACTACCTGAC GCTGCGCGAC TGGGCCAAAT CCATGGATGA GGCTCGACAG
CTTATGGTGT CCTTTATGCA AACCCAAGAG TATAGGGATG CCGTTATCAA CGGTATTTGG
CTAGATGGCA TCGTACACTG GCCCAGCAGT GGGATAACTG CCTGCTTGCG TGAAGCGGAA
ACTAAGCTGG CCCATGCAGG TTGGACACCT CTTTTCGAGG CTATTCGTTG GATTGCCAAG
ACCTATCCAG AGCTGACGCC GAAGCGCTAT GGCTGCGGTA GTTGGCGTCA TGTCATCCAT
GAGTCGCAGC AGTTTGAAAT TCGTAAGCAA AGCCAAGCCG ATAATGGCCC TACGGTGGTT
TGGTATCGAA GTCGCCCGAG GGAAACCTCC AAGGAACAGG AGTAA
 
Protein sequence
MDEIIPLPSD PLPDLQRTVQ RKLGRCILQS QQYERLLKAM VAHGELSGPP ERLQAIRDEK 
VACADKKTLG TLVGMLTESY LKLPDLSDEP EQAEPIDRVW VSFRCQMELT EERYAETKAA
LKELVDLRNE LVHHFLQRFD LWGVDGCIAA ESYLDESYET IDGHYLTLRD WAKSMDEARQ
LMVSFMQTQE YRDAVINGIW LDGIVHWPSS GITACLREAE TKLAHAGWTP LFEAIRWIAK
TYPELTPKRY GCGSWRHVIH ESQQFEIRKQ SQADNGPTVV WYRSRPRETS KEQE