Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0007 |
Symbol | |
ID | 1181615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 10179 |
End bp | 11063 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637391387 |
Product | hypothetical protein |
Protein accession | NP_789869 |
Protein GI | 28867250 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGAAA TCATCCCCCT GCCCTCAGAT CCTCTGCCTG ACCTTCAGCG CACCGTGCAG CGCAAGCTTG GGCGCTGCAT ATTGCAGTCG CAGCAGTACG AGCGGCTGCT GAAGGCCATG GTGGCCCATG GCGAGTTGAG TGGCCCTCCG GAACGACTTC AGGCGATTCG CGACGAGAAG GTTGCCTGTG CCGATAAGAA AACTCTGGGT ACCTTGGTGG GGATGCTGAC CGAGAGCTAT CTGAAACTGC CGGACTTGTC TGATGAGCCA GAGCAAGCGG AGCCAATTGA TCGGGTATGG GTTAGCTTCC GATGTCAGAT GGAGTTAACC GAAGAACGTT ATGCCGAGAC CAAGGCTGCG CTGAAGGAGT TGGTCGACCT GCGTAACGAG TTGGTGCACC ACTTCCTTCA GCGCTTCGAC CTTTGGGGCG TCGATGGCTG TATAGCCGCT GAGTCATATC TCGATGAAAG TTACGAAACC ATCGACGGCC ACTACCTGAC GCTGCGCGAC TGGGCCAAAT CCATGGATGA GGCTCGACAG CTTATGGTGT CCTTTATGCA AACCCAAGAG TATAGGGATG CCGTTATCAA CGGTATTTGG CTAGATGGCA TCGTACACTG GCCCAGCAGT GGGATAACTG CCTGCTTGCG TGAAGCGGAA ACTAAGCTGG CCCATGCAGG TTGGACACCT CTTTTCGAGG CTATTCGTTG GATTGCCAAG ACCTATCCAG AGCTGACGCC GAAGCGCTAT GGCTGCGGTA GTTGGCGTCA TGTCATCCAT GAGTCGCAGC AGTTTGAAAT TCGTAAGCAA AGCCAAGCCG ATAATGGCCC TACGGTGGTT TGGTATCGAA GTCGCCCGAG GGAAACCTCC AAGGAACAGG AGTAA
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Protein sequence | MDEIIPLPSD PLPDLQRTVQ RKLGRCILQS QQYERLLKAM VAHGELSGPP ERLQAIRDEK VACADKKTLG TLVGMLTESY LKLPDLSDEP EQAEPIDRVW VSFRCQMELT EERYAETKAA LKELVDLRNE LVHHFLQRFD LWGVDGCIAA ESYLDESYET IDGHYLTLRD WAKSMDEARQ LMVSFMQTQE YRDAVINGIW LDGIVHWPSS GITACLREAE TKLAHAGWTP LFEAIRWIAK TYPELTPKRY GCGSWRHVIH ESQQFEIRKQ SQADNGPTVV WYRSRPRETS KEQE
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