| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0005 |
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| Symbol | |
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| ID | 1181613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 7092 |
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| End bp | 8798 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637391385 |
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| Product | type I restriction-modification system, M subunit, putative |
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| Protein accession | NP_789867 |
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| Protein GI | 28867248 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
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| TIGRFAM ID | [TIGR00497] type I restriction system adenine methylase (hsdM) |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTACAATC AGGCACACTT TTTTCTGATA TGCCCATGCT GGATGGCAGT AGTCACTGGC
GTTGGGCTTC GTGCTTTTAT AGGGATTGAT TTACCCATGG CTGACAAGTT GTCACTCGAA
ACGCTGGAGT CTTGGCTCTG GGAATCCGCG AACATTCTGC GCGGTTCCAT CGACTCTTCC
GACTTCAAGA ACTACATCTT CGGCCTGCTC TTTCTCAAAC GCTACAACGA CGTGTTCGAC
GAGCGTGTCA CCAAGCTGAG GGAAGAGGAA AACCTGAGCT ATGGCGAAGC TCAGGAGGAA
ATCGAGGACA AATGGGGCAA GTACCCTATC AGTGCCCGCT GGTTTGACTT GATTTCACGT
ACCGAGAATA TCGGGGAGGC TCTGGACAAG GCGTTCGCGA CCATTGAGGC CAACAACCCC
GAATTGCAAC ACGTACTGAC CGCTACCCAG TATGGTGACA AGCGAGTGCT GGCGGATGCC
ACCTTGCAGC GCCTGCTGCG TCACTTTAAC CAGTACAAAT TGGGCAATGA CGACCTGTAT
AAGGCCGACA TGCTGGGCGA TGCTTACGAG TATTTGATCA AGCAGTTTGC CGACGATGCG
GGTAAGAAAG GTGGCGAGTT CTATACGCCA AAGGCAGTGG TGCAACTGGT GGTTGAGTTG
ATTGATCCGC GACCGGGGCA CAGTGTGTAT GATCCCACCT GCGGCAGTGG TGGTATGTTG
GTTGAGAGCG CCCATCATGT ATCTGGTTTG CCCGATGGCA CCTTGATGGG CAAGCCTAAT
GTGCTGCTGT ACGGGCAGGA AAAGAACCTA GGCACCTGGG CCATTGCCAA GCTCAATCTT
TACCTGCACA ACATGCATGC ATCTATTGAA CGTGGAGATA CGCTGGTCGA ACCCAAACAC
CTCGACGGCG ATTACCTGAA GACATTCGAC AGGGTTATTG CTAATCCTCC GTTCTCAGCC
AAATCCTGGT GGACTCCGCT GGAGTTGAGC AACGAAAACG AGCAGGAGAA TGGCAAGAAG
GTCAAAGCGC CCAACTATAA GCAGGTCAGC GATCCCTATG GTCGGTTAGT TTATGGCGTC
CCGCCACGGG GCTATGCTGA CCTTGCCTTT GCTCAGCATA TGCTGGCTAG CCTCAAGGCT
GATGGCCGCA TGGGCGTTAT CCTGCCCCAT GGAGTGCTGT TTCGAAGTGG CGAGGAAGGC
AAGATCCGCG AAGGACTGCT GTTCGGGACT GGCGCCGCCA GCGGCAACCA GCCGGGCGAC
GTGATTGAAG CCATCGTCGG CCTGCCCTCA GCCCTGTTCT ACAACACCGG CATCCCGGCT
TGCGTGTTGA TCCTGAACAA GCAAAAACCC TCTGCCCTAA AGGACAAGGT CATCATCATT
GACGGCAGCC GAGACTATCT AGAAGGTAAG GCGCAGAACA GCCTACATGC TGAAGATATC
TTGCGCATTG TCAGCACCCA CAAGGCGGCA TTTGAGCAGC AAGTTGAGGT CGAAAACTAT
TGTCGGTTGG TGACTCTGGA CGAAATCCGT AGCAATGACG GTAACCTCAA CATTGTCCGT
TACATCGATA ACGGTGAGTC CGACGAGGTC GTAAATGTGG CTGCCACTTT GGCGCATATG
GCGACCCTGG CCAAGGAGGA AGCGCAGATT GATCAGCGGC TCAATCGCTA TTTGATGGAG
TTGGGACTGC TGGAGACTGG GGTATGA
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| Protein sequence | MYNQAHFFLI CPCWMAVVTG VGLRAFIGID LPMADKLSLE TLESWLWESA NILRGSIDSS
DFKNYIFGLL FLKRYNDVFD ERVTKLREEE NLSYGEAQEE IEDKWGKYPI SARWFDLISR
TENIGEALDK AFATIEANNP ELQHVLTATQ YGDKRVLADA TLQRLLRHFN QYKLGNDDLY
KADMLGDAYE YLIKQFADDA GKKGGEFYTP KAVVQLVVEL IDPRPGHSVY DPTCGSGGML
VESAHHVSGL PDGTLMGKPN VLLYGQEKNL GTWAIAKLNL YLHNMHASIE RGDTLVEPKH
LDGDYLKTFD RVIANPPFSA KSWWTPLELS NENEQENGKK VKAPNYKQVS DPYGRLVYGV
PPRGYADLAF AQHMLASLKA DGRMGVILPH GVLFRSGEEG KIREGLLFGT GAASGNQPGD
VIEAIVGLPS ALFYNTGIPA CVLILNKQKP SALKDKVIII DGSRDYLEGK AQNSLHAEDI
LRIVSTHKAA FEQQVEVENY CRLVTLDEIR SNDGNLNIVR YIDNGESDEV VNVAATLAHM
ATLAKEEAQI DQRLNRYLME LGLLETGV
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