Gene PSPTO_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0005 
Symbol 
ID1181613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp7092 
End bp8798 
Gene Length1707 bp 
Protein Length568 aa 
Translation table11 
GC content54% 
IMG OID637391385 
Producttype I restriction-modification system, M subunit, putative 
Protein accessionNP_789867 
Protein GI28867248 
COG category[V] Defense mechanisms 
COG ID[COG0286] Type I restriction-modification system methyltransferase subunit 
TIGRFAM ID[TIGR00497] type I restriction system adenine methylase (hsdM) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTACAATC AGGCACACTT TTTTCTGATA TGCCCATGCT GGATGGCAGT AGTCACTGGC 
GTTGGGCTTC GTGCTTTTAT AGGGATTGAT TTACCCATGG CTGACAAGTT GTCACTCGAA
ACGCTGGAGT CTTGGCTCTG GGAATCCGCG AACATTCTGC GCGGTTCCAT CGACTCTTCC
GACTTCAAGA ACTACATCTT CGGCCTGCTC TTTCTCAAAC GCTACAACGA CGTGTTCGAC
GAGCGTGTCA CCAAGCTGAG GGAAGAGGAA AACCTGAGCT ATGGCGAAGC TCAGGAGGAA
ATCGAGGACA AATGGGGCAA GTACCCTATC AGTGCCCGCT GGTTTGACTT GATTTCACGT
ACCGAGAATA TCGGGGAGGC TCTGGACAAG GCGTTCGCGA CCATTGAGGC CAACAACCCC
GAATTGCAAC ACGTACTGAC CGCTACCCAG TATGGTGACA AGCGAGTGCT GGCGGATGCC
ACCTTGCAGC GCCTGCTGCG TCACTTTAAC CAGTACAAAT TGGGCAATGA CGACCTGTAT
AAGGCCGACA TGCTGGGCGA TGCTTACGAG TATTTGATCA AGCAGTTTGC CGACGATGCG
GGTAAGAAAG GTGGCGAGTT CTATACGCCA AAGGCAGTGG TGCAACTGGT GGTTGAGTTG
ATTGATCCGC GACCGGGGCA CAGTGTGTAT GATCCCACCT GCGGCAGTGG TGGTATGTTG
GTTGAGAGCG CCCATCATGT ATCTGGTTTG CCCGATGGCA CCTTGATGGG CAAGCCTAAT
GTGCTGCTGT ACGGGCAGGA AAAGAACCTA GGCACCTGGG CCATTGCCAA GCTCAATCTT
TACCTGCACA ACATGCATGC ATCTATTGAA CGTGGAGATA CGCTGGTCGA ACCCAAACAC
CTCGACGGCG ATTACCTGAA GACATTCGAC AGGGTTATTG CTAATCCTCC GTTCTCAGCC
AAATCCTGGT GGACTCCGCT GGAGTTGAGC AACGAAAACG AGCAGGAGAA TGGCAAGAAG
GTCAAAGCGC CCAACTATAA GCAGGTCAGC GATCCCTATG GTCGGTTAGT TTATGGCGTC
CCGCCACGGG GCTATGCTGA CCTTGCCTTT GCTCAGCATA TGCTGGCTAG CCTCAAGGCT
GATGGCCGCA TGGGCGTTAT CCTGCCCCAT GGAGTGCTGT TTCGAAGTGG CGAGGAAGGC
AAGATCCGCG AAGGACTGCT GTTCGGGACT GGCGCCGCCA GCGGCAACCA GCCGGGCGAC
GTGATTGAAG CCATCGTCGG CCTGCCCTCA GCCCTGTTCT ACAACACCGG CATCCCGGCT
TGCGTGTTGA TCCTGAACAA GCAAAAACCC TCTGCCCTAA AGGACAAGGT CATCATCATT
GACGGCAGCC GAGACTATCT AGAAGGTAAG GCGCAGAACA GCCTACATGC TGAAGATATC
TTGCGCATTG TCAGCACCCA CAAGGCGGCA TTTGAGCAGC AAGTTGAGGT CGAAAACTAT
TGTCGGTTGG TGACTCTGGA CGAAATCCGT AGCAATGACG GTAACCTCAA CATTGTCCGT
TACATCGATA ACGGTGAGTC CGACGAGGTC GTAAATGTGG CTGCCACTTT GGCGCATATG
GCGACCCTGG CCAAGGAGGA AGCGCAGATT GATCAGCGGC TCAATCGCTA TTTGATGGAG
TTGGGACTGC TGGAGACTGG GGTATGA
 
Protein sequence
MYNQAHFFLI CPCWMAVVTG VGLRAFIGID LPMADKLSLE TLESWLWESA NILRGSIDSS 
DFKNYIFGLL FLKRYNDVFD ERVTKLREEE NLSYGEAQEE IEDKWGKYPI SARWFDLISR
TENIGEALDK AFATIEANNP ELQHVLTATQ YGDKRVLADA TLQRLLRHFN QYKLGNDDLY
KADMLGDAYE YLIKQFADDA GKKGGEFYTP KAVVQLVVEL IDPRPGHSVY DPTCGSGGML
VESAHHVSGL PDGTLMGKPN VLLYGQEKNL GTWAIAKLNL YLHNMHASIE RGDTLVEPKH
LDGDYLKTFD RVIANPPFSA KSWWTPLELS NENEQENGKK VKAPNYKQVS DPYGRLVYGV
PPRGYADLAF AQHMLASLKA DGRMGVILPH GVLFRSGEEG KIREGLLFGT GAASGNQPGD
VIEAIVGLPS ALFYNTGIPA CVLILNKQKP SALKDKVIII DGSRDYLEGK AQNSLHAEDI
LRIVSTHKAA FEQQVEVENY CRLVTLDEIR SNDGNLNIVR YIDNGESDEV VNVAATLAHM
ATLAKEEAQI DQRLNRYLME LGLLETGV