| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0004 |
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| Symbol | gyrB |
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| ID | 1181612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4147 |
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| End bp | 6564 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637391384 |
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| Product | DNA gyrase, subunit B |
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| Protein accession | NP_789866 |
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| Protein GI | 28867247 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAA ACCAAACGTA CGACTCGTCC AGCATTAAAG TGCTGAAAGG ACTTGATGCC
GTACGCAAGC GTCCCGGAAT GTACATCGGT GATACAGACG ATGGCAGCGG TCTGCACCAT
ATGGTGTTCG AGGTGGTTGA TAACTCGATC GACGAAGCAT TGGCAGGCCA TTGCGACGAC
ATCAGCATCA TCATCCATCC AGACGAATCT ATCACCGTGC GCGACAACGG CCGCGGTATT
CCGGTAGACG TGCATAAAGA AGAAGGCGTG TCGGCAGCCG AAGTCATCAT GACCGTGCTC
CACGCGGGTG GTAAGTTCGA TGACAACTCC TACAAAGTAT CCGGCGGTTT GCACGGTGTA
GGTGTTTCCG TGGTCAACGC CCTTTCAGAA CTTCTGTTGC TGACAGTGCG TCGCAGCGGC
AAGATCTGGG AACAGACCTA CATTCACGGT GTTCCACAAG AACCGATGAA AATCGTCGGC
GAAAGCGACA GCACCGGCAC CCAGATTCAC TTCAAGCCAT CTGCTGAGAC CTTCAAGAAT
ATCCACTTCA GCTGGGACAT TCTGGCCAAG CGGATCCGTG AACTGTCGTT CCTGAACTCC
GGTGTTGGCA TCGTCCTCAA GGACGAGCGT AGCGGCAAGG AAGAACTGTT CAAGTACGAA
GGCGGTTTGC GTGCGTTCGT TGAATACCTG AACACCAACA AGACGCCGGT CAACGAAGTG
TTCCACTTCA ATGTCCAGCG CGATGACGGT ATTGGCGTCG AGATTGCCCT GCAGTGGAAC
GACAGCTTCA ACGAGAACCT GTTGTGCTTC ACCAACAACA TTCCACAGCG CGATGGCGGC
ACTCACCTGG TGGGGTTCCG ATCCGCACTG ACGCGTAACC TGAACAACTA CATCGAGCAG
GAAGGTCTGG CCAAGAAGCA CAAGGTCGCG ACCACCGGTG ACGATGCGCG TGAAGGTCTG
ACTGCAATTA TCTCGGTCAA AGTACCTGAT CCGAAGTTCA GCTCGCAGAC CAAAGACAAG
CTGGTTTCGT CCGAAGTCAA AACTGCAGTC GAACAGGAAA TGGGCAAGTA CTTCTCCGAC
TTCCTGCTGG AAAACCCGAA CGAAGCCAAA GCCGTCGTCG GCAAGATGAT CGACGCAGCC
CGTGCCCGTG AAGCCGCGCG CAAGGCCCGT GAGATGACTC GCCGTAAAGG CGCGCTGGAC
ATCGCCGGCT TGCCAGGCAA ACTGGCTGAC TGCCAGGAAA AAGACCCTGC CCTCTCCGAA
CTGTACCTGG TGGAAGGGGA CTCTGCTGGC GGATCAGCCA AGCAGGGACG TAACCGTAGA
ACCCAGGCCA TCCTGCCTCT TAAGGGCAAG ATTCTGAACG TTGAAAAAGC ACGCTTCGAC
AAGATGATCT CTTCTCAGGA AGTGGGCACC TTGATCACCG CGCTGGGCTG TGGCATTGGC
CGCGAAGAGT ACAACATCGA CAAGTTGCGC TATCACAACA TCATCATCAT GACCGATGCT
GACGTCGACG GCTCGCACAT CCGCACCCTG CTGCTGACCT TCTTCTTCCG TCAGTTGCCG
GAGCTAATCG AGCGTGGCTA CATATACATC GCTCAGCCGC CGCTGTACAA GGTCAAGAAA
GGCAAGCAGG AGCAGTACAT CAAGGACGAC GAGGCCATGG AAGAATACAT GACCCAATCG
GCCCTTGAAG ACGCCAGTCT GCACCTCAGC GAGTCTGCAC CGGGTATCTC GGGCACCGCG
CTGGAGAAAC TGGTTCACGA CTTCCGCATG GTCATGAAAA CCCTCAAGCG CCTCTCGCGT
CTGTACCCAC AGGAATTGAC CGAGCACTTC GTCTACCTGC CGCCAATCAC CCTGGAGCAG
CTATCCGACC ACGAGGGCAT GCAAGCCTGG CTGGCACTGT TCGACGTGCG TCTGCGCACT
GGCGAGAAGT CGGGTCTGGT CTACAAAGCC AGCCTGCGCG AAGACCGTGA GCGTAACGTC
TGGCTGCCAG AGGTCGAACT GATCTCCCAC GGCCTGTCGA ATTACATCAC CTTCAACCGC
GACTTCTTCG GCAGCAACGA CTACAAGACC GTCACGGCCC TGGGCGCGCA GATAAGCACG
CTGCTGGAAG AAGGCGCGTA CGTGCAACGT GGCGAGCGCA AAAAGCCCGT CACCGAGTTC
AAACAAGCCC TCGCCTGGCT GATGGCTGAA AGCACCAAGC GTCATACCAT CCAGCGCTAC
AAAGGACTGG GTGAAATGAA CCCGGATCAG CTCTGGGAAA CCACTATGGA CCCAAGCGTG
CGTCGCATGC TCAAAGTCAC TATCGAAGAC GCCATTGGCG CTGACCAGAT CTTCAACACC
CTGATGGGTG ATGCGGTCGA ACCACGCCGT GACTTCATCG AGAGCAATGC GCTGGCGGTG
TCCAACCTGG ACTTCTGA
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| Protein sequence | MSENQTYDSS SIKVLKGLDA VRKRPGMYIG DTDDGSGLHH MVFEVVDNSI DEALAGHCDD
ISIIIHPDES ITVRDNGRGI PVDVHKEEGV SAAEVIMTVL HAGGKFDDNS YKVSGGLHGV
GVSVVNALSE LLLLTVRRSG KIWEQTYIHG VPQEPMKIVG ESDSTGTQIH FKPSAETFKN
IHFSWDILAK RIRELSFLNS GVGIVLKDER SGKEELFKYE GGLRAFVEYL NTNKTPVNEV
FHFNVQRDDG IGVEIALQWN DSFNENLLCF TNNIPQRDGG THLVGFRSAL TRNLNNYIEQ
EGLAKKHKVA TTGDDAREGL TAIISVKVPD PKFSSQTKDK LVSSEVKTAV EQEMGKYFSD
FLLENPNEAK AVVGKMIDAA RAREAARKAR EMTRRKGALD IAGLPGKLAD CQEKDPALSE
LYLVEGDSAG GSAKQGRNRR TQAILPLKGK ILNVEKARFD KMISSQEVGT LITALGCGIG
REEYNIDKLR YHNIIIMTDA DVDGSHIRTL LLTFFFRQLP ELIERGYIYI AQPPLYKVKK
GKQEQYIKDD EAMEEYMTQS ALEDASLHLS ESAPGISGTA LEKLVHDFRM VMKTLKRLSR
LYPQELTEHF VYLPPITLEQ LSDHEGMQAW LALFDVRLRT GEKSGLVYKA SLREDRERNV
WLPEVELISH GLSNYITFNR DFFGSNDYKT VTALGAQIST LLEEGAYVQR GERKKPVTEF
KQALAWLMAE STKRHTIQRY KGLGEMNPDQ LWETTMDPSV RRMLKVTIED AIGADQIFNT
LMGDAVEPRR DFIESNALAV SNLDF
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