Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_A0170 |
Symbol | |
ID | 1172593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004349 |
Strand | + |
Start bp | 159090 |
End bp | 159647 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637346607 |
Product | ISSod9, DNA-invertase |
Protein accession | NP_720484 |
Protein GI | 24376376 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.579928 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGATCG GTTATGCAAG AGTATCAACA CAAGATCAGC ACCTAGAACT TCAGCGAGAA GCCTTGCTTA AAGCGGGGTG CGAAAAAGTG TTTGAAGATA CAATCAGTGG TACTCGGGCT GACAGGCTTG GTTTGAGCAA AGCCCTTGAA ATACTGCGCG AAGGGGATAC ATTGGTTGTT TGGAAGCTGG ATAGATTGGG CCGGTCAGTC AAACAACTGG TAGAGCTGGT CAGCGATCTG CACAAACAAA ACGTCCAGTT TAAGAGTCTC ACCGATTCTA TCGATACCGG CACGCCATCG GGCCGATTCT TTTTTCATGT CATGGCAAGC CTCGCAGAGA TGGAACGAGA CTTGATCGTC GAAAGAACCC GTGCGGGGTT GGACGTTGCC AGACAACTCG GTCGTAAAGG CGGTCGCAAG CCGAAGATGA CCGACAGCAA GATCGAATCA GCCAAAAAGC TATTAGCCAG TGGAGTCCCC CCCAAGGATG TGGCTAAGAA TCTTGGCGTG TCGGTTCCTA CGCTATACCG CTGGCTCCCT GCCTCTGCGC ATGCTTAG
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Protein sequence | MLIGYARVST QDQHLELQRE ALLKAGCEKV FEDTISGTRA DRLGLSKALE ILREGDTLVV WKLDRLGRSV KQLVELVSDL HKQNVQFKSL TDSIDTGTPS GRFFFHVMAS LAEMERDLIV ERTRAGLDVA RQLGRKGGRK PKMTDSKIES AKKLLASGVP PKDVAKNLGV SVPTLYRWLP ASAHA
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