| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_A0167 |
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| Symbol | |
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| ID | 1172590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004349 |
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| Strand | - |
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| Start bp | 155302 |
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| End bp | 158268 |
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| Gene Length | 2967 bp |
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| Protein Length | 988 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637346604 |
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| Product | ISSod9, transposase |
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| Protein accession | NP_720481 |
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| Protein GI | 24376373 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4644] Transposase and inactivated derivatives, TnpA family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCGCC GCTCAATCCT ATCCGCCGCA GAGCGAGACA GCCTGCTGGT GTTACCCGAT
ACCCAAGACG AACTGATCCG CCACTATACG TTTAGCGAAC CCGATCTATC ACTGATACGG
CAGCGGCGCG GTGATGCTAA CCGCTTGGGG ATCGCGGTAC AGTTATGCTT GCTGCGCTTC
CCAGGCCAGG GCTTGTTGCC CGACGCTACG GTGCCAATGC CTCTGCTGCA ATGGATAGGA
CAACAGTTAC AGCTCGATCC TGTATGTTGG CCGCAGTATG CCGAGCGAGA GGAGACACGG
CGCGAGCACT TGCTCGAACT GCGGGTGTAT CTTGGCATGG AACCATTTAG TCAAGTGCAC
CATCGGCAGG CTGTCCATAC CACGACCGAA CTGGCCTTGC AGACTGACAA GGGCATAGTG
TTGGCCAACA GCGTAGTCGA GACGCTGCGT CATAAACACA TCATTTTGCC AACGTTAGAT
GTTGTCGAGC GCGTCTGTGC CGAGGCTCTA ACCCGTGCAA ACCGGCGTAT CTACGACACC
TTGACCGAAC CACTATCAGG CTCGCACCGC CACCGGCTCG ATGATCTGCT CAAGCTTCGG
GACAACAACA AAACGACTAC GCTGGCTTGG CTTCGCCTGT CTCCGGTCAA ACCCAATTCG
CGGCACATGC TTGAGCACAT CGAACGACTC AAGGTATGGC AGGCGCTTGA TCTTCCTATT
GGTGTCGATC GTCTGATCCA CCAAAACCGA TTGCTCAAGA TCGCCCGAGA AGGCGGACAG
ATGACCCCCG CCGATTTGGC CAAGTTCGAG CCACAACGCC GCTATGCGAC TTTGGTTGCG
CTAGCCATCG AGGGGATGGC CACTGTTACA GATGAAATTA TTGATCTGCA TGACCGCATC
ATGGGCAAGC TGTTCAATGA TGCCAAGAAG CGACATCAGA AACAGTTTCA GGCATCGGGG
AAGGCTATCA ATGCCAAGGT GCGCCTGTTC GGCCGTATCG GCCAAGTGTT GATCGACGCT
AAGCAAGCGG GTGATGATCC GTTTGCTGCT ATCGAGGGCG TCATATCCTG GGAGGCCTTT
GCCAAGAGCG TGACAGAGGC ACAATCGCTC GCGCAGCCCG AGGAATTCGA TTTCCTGTAC
CGTCTCGGTG AGAGCTACGC CACACTACGC CGTTACGCAC CGACCTTCCT CACCGCGCTA
AAGTTGCGGG CCGCACCGGC TGCCAAAGGT GTATTGGAGG CCATCGAAGT ACTGCGCAGC
ATGAACAACG ACAACGCCCG AAAAGTACCT GCAGATGCGC CAATTGATTT CATCAAGCCG
CGTTGGCAGA AGCTGGTGAT AACCGATACC GGCATCGACC GGCGTTACTA CGAGCTATGC
GCGCTGTCGG AGATGAGGAA CGCATTGCGT TCCGGTGACA TCTGGGTACA GGGATCGCGC
CAGTTCAAGG ACTTCGAGGA CTACCTTGTA CCACCCGCGA AATTCGTCAG TCTCAAGCAG
ACCAATCAAT TGCCGCTGGC CGTAGCCACC GACTGTGAGC AGTATCTGAA TGAACGGCTG
ACGCAATTGG AAACGCAGCT CGCCACCGTC AACAGCATGG CGCAGGCTAA CGAATTACCG
GATGCCATCA TCACGGCCTC TGGCCTAAAG ATAACGCCGC TGGATGCAGT AGTACCAGAT
ACCGCGCAGC GCCTTATCGA TCAGGCTGCT AGGATCCTGC CGCACGTCAA GATCACTGAG
TTACTGCTTG AAGTGGACGA ATGGACGGGC TTTACCAGGC ACTTCGCACA CCTGAAATCT
GGTGTTCTGG CCAAGGACAA GAACCTGCTA CTGACGACTA TCCTTGCCGA TGCGATCAAT
CTGGGTCTGA CCAAGATGGC AGAATCGTGT CCAGGAACGA CTTATGCCAA GCTCGCTTGG
CTGCAAGCCT GGCATATCCG TGACGAAACC TATGGCGCGG CCTTGTCCGA GCTGGTCAAT
GCGCAGTACC GGCATCCGTT TGCCGAACAT TGGGGCGATG GTTCTACATC CTCCTCTGAC
GGCCAGAATT TTCGCACCGG CAACAAGGCG GAGAGTACGG GGCACATCAA TCCGAAATAT
GGCAGTAGTC CAGGACGGAC CTTTTACACG CATATTTCCG ACCAGTACGC ACCATTTCAT
ACTAAGGTGG TCAATGTCGG TGTGCGCGAC TCAACCTACG TGCTCGACGG CCTGCTCTAC
CATGAATCTG ACTTACGGAT CGAAGAGCAC TACACCGACA CGGCTGGCTT CACCGATCAC
GTTTTCGCGT TGATGCACCT GTTGGGGTTT CGCTTCGCAC CGCGTATCCG CGACTTGGGT
GAGACCAAGC TCTACATTCC AAAGCGCGAT GTCACCTACG AGGGATTGAA ATCAATGATT
GGCGGGACGC TCAACATCAA GCTAATCCGT ACACATTGGG ACGAGATCTT GCGGCTGGCT
ACCTCGATAA AACAGGGAAC GGTGACGGCC TCACTCATGC TGAGGAAGCT TGGCAGCTAC
CCACGTCAGA ATGGCTTGGC GGTCGCCTTG CGCGAATTGG GGCGTATCGA GCGCACGCTG
TTCATTCTGG ATTGGCTGCA AAGTGTCGAG CTCCGCCGCC GGGTACATGC CGGACTGAAT
AAGGGGGAGG CTCGTAACGC CTTGGCTCGT GCCGTGTTTT TCAATCGACT GGGGGAGATC
CGTGACCGCA GTTTTGAGCA ACAGCGTTAC CGGGCAAGTG GCCTTAACTT GGTGACTGCC
GCCATCGTGC TATGGAACAC CGTCTATCTG GAAAGGGTGG CACATGGGTT ACGTGCCAAG
GGACATGCCG TCGATGAAGA GTTATTGCAG TACCTATCGC CGCTAGGCTG GGAGCACATC
AACCTGACAG GGGATTATCT GTGGCGCAGC AGCGCCAAGA TAGGTTCAGG TAAATTCAGG
CCTCTACGAC CTCTATCACC GGCTTAG
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| Protein sequence | MPRRSILSAA ERDSLLVLPD TQDELIRHYT FSEPDLSLIR QRRGDANRLG IAVQLCLLRF
PGQGLLPDAT VPMPLLQWIG QQLQLDPVCW PQYAEREETR REHLLELRVY LGMEPFSQVH
HRQAVHTTTE LALQTDKGIV LANSVVETLR HKHIILPTLD VVERVCAEAL TRANRRIYDT
LTEPLSGSHR HRLDDLLKLR DNNKTTTLAW LRLSPVKPNS RHMLEHIERL KVWQALDLPI
GVDRLIHQNR LLKIAREGGQ MTPADLAKFE PQRRYATLVA LAIEGMATVT DEIIDLHDRI
MGKLFNDAKK RHQKQFQASG KAINAKVRLF GRIGQVLIDA KQAGDDPFAA IEGVISWEAF
AKSVTEAQSL AQPEEFDFLY RLGESYATLR RYAPTFLTAL KLRAAPAAKG VLEAIEVLRS
MNNDNARKVP ADAPIDFIKP RWQKLVITDT GIDRRYYELC ALSEMRNALR SGDIWVQGSR
QFKDFEDYLV PPAKFVSLKQ TNQLPLAVAT DCEQYLNERL TQLETQLATV NSMAQANELP
DAIITASGLK ITPLDAVVPD TAQRLIDQAA RILPHVKITE LLLEVDEWTG FTRHFAHLKS
GVLAKDKNLL LTTILADAIN LGLTKMAESC PGTTYAKLAW LQAWHIRDET YGAALSELVN
AQYRHPFAEH WGDGSTSSSD GQNFRTGNKA ESTGHINPKY GSSPGRTFYT HISDQYAPFH
TKVVNVGVRD STYVLDGLLY HESDLRIEEH YTDTAGFTDH VFALMHLLGF RFAPRIRDLG
ETKLYIPKRD VTYEGLKSMI GGTLNIKLIR THWDEILRLA TSIKQGTVTA SLMLRKLGSY
PRQNGLAVAL RELGRIERTL FILDWLQSVE LRRRVHAGLN KGEARNALAR AVFFNRLGEI
RDRSFEQQRY RASGLNLVTA AIVLWNTVYL ERVAHGLRAK GHAVDEELLQ YLSPLGWEHI
NLTGDYLWRS SAKIGSGKFR PLRPLSPA
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