Gene SO_A0149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_A0149 
Symbol 
ID1172572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004349 
Strand
Start bp136564 
End bp137412 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content37% 
IMG OID637346588 
Producthypothetical protein 
Protein accessionNP_720465 
Protein GI24376357 
COG category[R] General function prediction only 
COG ID[COG1237] Metal-dependent hydrolases of the beta-lactamase superfamily II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAAC TTACAGCATT AGTTGATAAT ACTCGTTTAG ACAGTAGGCC AGAGCTAGCT 
GTTGAGCGGG GGCTCTCTTT TCATGTAGAG ACAATGGGAA GCCAAATTCT GTTTGATACA
GGAAGCAGTA GTACGTTCTG TGAAAATGCG GCATTGATGA ATATTAGCAT TCAAGATGTT
GATCTTGCAG TGATATCTCA TCGTCACCAC GACCATTGCA ACGGTACAAC TCACTTTATT
GAACGAAATT CCAAAGCAAA GATATATCTG AAAGACTGTG AGGATAAAAA CTATCTATTT
AAGGCGTTTG GTTTTAAGAA TGATGTTGGT ATTAATAAAG AATTGCTAAA AAATGCTAGT
GAGCGCTTAA TTTTTGTTGA ACATACAACA GAGATATTGC CGAACATTTT TATTATAACC
GAAATTAGTG ATAAATATGA AAAACCAAAA GGGAATCGGT ATCTCTATAC CCAATCAGAA
AATGGTTACA AAAATGATAC ATTTGACCAT GAATTACTAT TGGTAGTTAA AGAAAGCGAT
GGCCTAATCG TCTTTACTGG TTGTGCTCAC AGCGGTGTTT TAAATATGGT TGAGACTGCT
ATTGAACTGT TCCCTAACCA CAGAATAAAA GCAGTTGTTG GAGGTTTTCA CTTGGTTGGT
TTGCCACTAT TGAATAGCAT TGGTGGGACT AAACAAGATA TTCAAGCAAT CGGTCAGGCT
TTGTCACACT ATCCAATTGA TAAGCTGTAC ACAGGACATT GCACAGGAAT GAAAGCATTT
GGATTACTTA AAGAAGTCCT TGGAGATCGT CTAGAACATT TACCAACGGG GCGAAGCGTA
TTAATTTAG
 
Protein sequence
MMKLTALVDN TRLDSRPELA VERGLSFHVE TMGSQILFDT GSSSTFCENA ALMNISIQDV 
DLAVISHRHH DHCNGTTHFI ERNSKAKIYL KDCEDKNYLF KAFGFKNDVG INKELLKNAS
ERLIFVEHTT EILPNIFIIT EISDKYEKPK GNRYLYTQSE NGYKNDTFDH ELLLVVKESD
GLIVFTGCAH SGVLNMVETA IELFPNHRIK AVVGGFHLVG LPLLNSIGGT KQDIQAIGQA
LSHYPIDKLY TGHCTGMKAF GLLKEVLGDR LEHLPTGRSV LI