Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_A0149 |
Symbol | |
ID | 1172572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004349 |
Strand | + |
Start bp | 136564 |
End bp | 137412 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637346588 |
Product | hypothetical protein |
Protein accession | NP_720465 |
Protein GI | 24376357 |
COG category | [R] General function prediction only |
COG ID | [COG1237] Metal-dependent hydrolases of the beta-lactamase superfamily II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGAAAC TTACAGCATT AGTTGATAAT ACTCGTTTAG ACAGTAGGCC AGAGCTAGCT GTTGAGCGGG GGCTCTCTTT TCATGTAGAG ACAATGGGAA GCCAAATTCT GTTTGATACA GGAAGCAGTA GTACGTTCTG TGAAAATGCG GCATTGATGA ATATTAGCAT TCAAGATGTT GATCTTGCAG TGATATCTCA TCGTCACCAC GACCATTGCA ACGGTACAAC TCACTTTATT GAACGAAATT CCAAAGCAAA GATATATCTG AAAGACTGTG AGGATAAAAA CTATCTATTT AAGGCGTTTG GTTTTAAGAA TGATGTTGGT ATTAATAAAG AATTGCTAAA AAATGCTAGT GAGCGCTTAA TTTTTGTTGA ACATACAACA GAGATATTGC CGAACATTTT TATTATAACC GAAATTAGTG ATAAATATGA AAAACCAAAA GGGAATCGGT ATCTCTATAC CCAATCAGAA AATGGTTACA AAAATGATAC ATTTGACCAT GAATTACTAT TGGTAGTTAA AGAAAGCGAT GGCCTAATCG TCTTTACTGG TTGTGCTCAC AGCGGTGTTT TAAATATGGT TGAGACTGCT ATTGAACTGT TCCCTAACCA CAGAATAAAA GCAGTTGTTG GAGGTTTTCA CTTGGTTGGT TTGCCACTAT TGAATAGCAT TGGTGGGACT AAACAAGATA TTCAAGCAAT CGGTCAGGCT TTGTCACACT ATCCAATTGA TAAGCTGTAC ACAGGACATT GCACAGGAAT GAAAGCATTT GGATTACTTA AAGAAGTCCT TGGAGATCGT CTAGAACATT TACCAACGGG GCGAAGCGTA TTAATTTAG
|
Protein sequence | MMKLTALVDN TRLDSRPELA VERGLSFHVE TMGSQILFDT GSSSTFCENA ALMNISIQDV DLAVISHRHH DHCNGTTHFI ERNSKAKIYL KDCEDKNYLF KAFGFKNDVG INKELLKNAS ERLIFVEHTT EILPNIFIIT EISDKYEKPK GNRYLYTQSE NGYKNDTFDH ELLLVVKESD GLIVFTGCAH SGVLNMVETA IELFPNHRIK AVVGGFHLVG LPLLNSIGGT KQDIQAIGQA LSHYPIDKLY TGHCTGMKAF GLLKEVLGDR LEHLPTGRSV LI
|
| |