| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_A0145 |
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| Symbol | |
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| ID | 1172568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004349 |
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| Strand | - |
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| Start bp | 133536 |
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| End bp | 134180 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637346584 |
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| Product | ISSod1, transposase OrfB |
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| Protein accession | NP_720461 |
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| Protein GI | 24376353 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGTCA GTAAGTCAGG CTATTACGAT TGGCATAAAC GCCCTGCAAA CGTGATAAGC
GTTGAAACAC TGAAGCTTTA TCGCCTTGTT CGACAGCTAT TTAAGCAAAG TCGAGGCAGC
TTAGGGAATC GTGAAATGGT GAAGAAATTG CGCAAGGAAG GCTACCAGGT TGGTCGCTAT
CTCGTTCGTA AAATTATGCA CCGCCTTCGA CTCAAAGCAA CCCAGCGATG TGCTTACAAG
GTGACGACAC AGCGAAAACA CTCAGATGCA GTGGCTGATA ACCTGTTAAA CATGAACTTT
AATCCAGTAT CGGCTAATCA GGTCTGGGCG GGTGACGTGA CCTATTTAAA GACGGGTGAA
GGCTGGATGT ACTTAGCTGT GGTGATGGAT TTATATTCAC GCCGGATTGT GGGATGGCGC
ATAGACAAAC GCATGACCAC AGATTTGATA TCCAAGGCAT TAATAAAAGC CTACAACCTG
CGACAACCAG CGCGAGGGCT GGTATTTCAC AGTGACCGAG GCTCGCAATA TACCAGTAAA
CAATTCGGTA GGCTGCTATC GAGCTATGGT ATCCGAGCCA GCATGGGTGA TGTGGGTGCG
TGTTGGGATA ATGCCGAGGG CGTTCAAAAT TCTGTGTCAG GCTAA
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| Protein sequence | MSVSKSGYYD WHKRPANVIS VETLKLYRLV RQLFKQSRGS LGNREMVKKL RKEGYQVGRY
LVRKIMHRLR LKATQRCAYK VTTQRKHSDA VADNLLNMNF NPVSANQVWA GDVTYLKTGE
GWMYLAVVMD LYSRRIVGWR IDKRMTTDLI SKALIKAYNL RQPARGLVFH SDRGSQYTSK
QFGRLLSSYG IRASMGDVGA CWDNAEGVQN SVSG
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