Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_A0144 |
Symbol | |
ID | 1172567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004349 |
Strand | + |
Start bp | 132330 |
End bp | 133532 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637346583 |
Product | ISSod4, transposase |
Protein accession | NP_720460 |
Protein GI | 24376352 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3328] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.713152 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAAC CTTTTAACTT CGAACAAGCC CTTAAAGATC TGCAATCAGG TAAAAGCCTC ACAGGTAAAG ACAGCATTCT TGGCCCACTG ATCAAGCAAC TCACTGAAGC GGCTCTCCAG GCTGAGCTTG AGCAGCATTT AGCGCATGAT CCTCAGCCTA ATCGTAAAAA TGGCAAAACC CCTAAGACCA TTAAGCATCC GTCCGGTAAC TTTGAGTTAG ACGCGCCTAG AGACCGCAAT GGCACCTTTG AGCCTCAGTT GATTAAGAAA AATCAAACTA CGCTAACCGA TGAAATCGAA CGTAAAGTGT TATCGATGTT CAGTATAGGT ATGAGCTATC GCGATATTAA TCAACATGTT GAAGATATGT ATGGACTCAA TGTGTCTAAC GCAACAGTCA GTGCTATCAC TGACAAACTC ATCCCCGAAC TTAAAGCGTG GCAACAGCGC CCATTAGATA GCCATTATCC TATCGTGTGG CTTGATGCGA TACATTATAA AGTCAAAGAG GATGGGCGTT ACGTCAGTAA AGCCGTTTAC ACATTGTTAG CGCTTAATAT GAAAGGAAAA AAGGAAATTT TAGGGCTTCA CTTATCCGAA AATGAAGGCG CTAATTACTG GCTATCCGTA CTGACCGATC TTAATAATCG TGGTGTAAAA GATATTCTTA TCGCCTGTGT TGACGGCTTG ACCGGTTTCC CTGAGGCCAT AGCCAGTATC TTCCCTCATA CGGAAACACA GCTATGCGTT ATCCACCAGA TCCGCAACTC AATGAAGTAT GTCGCCTCAA AAAATCAGAA AGCGTTTATG GCTGATTTAA AGCCTGTGTA TCGAGCCGTG AGTAAAGAAG CCGCAGAGAT GGCATTGGAC GAACTGGAGG CCAAATGGGG TGATGCTTAT CCGCTGGTAA TCAACTCTTG GCGTCGCAAA TGGCATAATT TGTCCCATTA TTTTAAGTAC CCAGAACATA TCAGGAAAGT GATTTACACG ACCAATGCAG TTGAGGCTGT GCATCGCCAA TTTAGAAAGC TCACCAAAAC CAAAGGTGCA TTTCCTAATG AAAATAGCTT GTTGAAGCTA CTTTACGCAG GCATATTAAA CGCCTCAGAT AAATGGACCA TGCCAATCCA CAATTGGAGC CTTTGTTTAT CACAGTTAGC GATTTATTTT GAAGGGCGTT TAGATAGCGT GCTAGAAATT TAA
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Protein sequence | MTQPFNFEQA LKDLQSGKSL TGKDSILGPL IKQLTEAALQ AELEQHLAHD PQPNRKNGKT PKTIKHPSGN FELDAPRDRN GTFEPQLIKK NQTTLTDEIE RKVLSMFSIG MSYRDINQHV EDMYGLNVSN ATVSAITDKL IPELKAWQQR PLDSHYPIVW LDAIHYKVKE DGRYVSKAVY TLLALNMKGK KEILGLHLSE NEGANYWLSV LTDLNNRGVK DILIACVDGL TGFPEAIASI FPHTETQLCV IHQIRNSMKY VASKNQKAFM ADLKPVYRAV SKEAAEMALD ELEAKWGDAY PLVINSWRRK WHNLSHYFKY PEHIRKVIYT TNAVEAVHRQ FRKLTKTKGA FPNENSLLKL LYAGILNASD KWTMPIHNWS LCLSQLAIYF EGRLDSVLEI
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