| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_A0129 |
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| Symbol | |
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| ID | 1172552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004349 |
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| Strand | + |
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| Start bp | 113440 |
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| End bp | 114279 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637346571 |
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| Product | IS3 family transposase |
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| Protein accession | NP_720448 |
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| Protein GI | 24376340 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.384021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGACAGT TGTGTCAGCT GTTTGATGTT CATCCGAGCG GGTATTACGC GTGGAGGAGC
TGCGCAAAGT CGAAGCGACA ATGTGACAAT GAACGACTTA TAGGCCAACT CAAACAATGT
TGGCTTGAGT CTGGTGGTGT CTATGGATAC CGCAAACTCC ATCGAGATCT GCGTGATCTT
GGCGAGCAAT GCGGTATTAA TCGTGTACAT CGCCTGATGC AGCGAGCAGG ACAGCGAGCA
CAAGTTGGCT ATCGCAAGCC TAGAACTCGT AGTGGTGAGC AGCATGTTGT AACGCAAAAT
CGCTTAGAAC GGCAATTCAA CCCCTTAGCG CCGAACAAAG CGTGGGTGAC GGATATTACG
TACATCAAAA CGCATGAAGG TTGGCTCTAT CTTGGTGCTG TAATGGACTT GTTCTCACGT
CGAATTATTG GTTGGTCAAT GGGCAGTCGT ATCACCAAAG AGCTTGCGTT AGATGCTTTA
TTAATGGCGG TATGGAGTCG TAAACCTGCT GGCAAAGTGT TGGTTCATTC AGCTCAAGGA
AGCCAATACA CGAGCCATGA TTGGAGTGAG TTTCTAAGCG CTCATGGTTT GGAAGGTAGC
ATGAGCCGTC GAGGAAACTG CCACGATAAC GCAGTAGCAG AGAGTTTCTT TCAACTGCTG
AAACGTGAAC GAATTAAGCG AAAAATCTAT GCGACCAGGG ACGACGCAAA GATGGATGTG
TTTAATTATA TTGAGATGTT TTACAACCCG AAACGACAGC ATAGTTCCAA TGATGGACTA
TCACCGTTAG AGTATGAACG TCAGTATTTT AATGAGGTTA AAAGTCGTCT AGTGAAGTAG
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| Protein sequence | MRQLCQLFDV HPSGYYAWRS CAKSKRQCDN ERLIGQLKQC WLESGGVYGY RKLHRDLRDL
GEQCGINRVH RLMQRAGQRA QVGYRKPRTR SGEQHVVTQN RLERQFNPLA PNKAWVTDIT
YIKTHEGWLY LGAVMDLFSR RIIGWSMGSR ITKELALDAL LMAVWSRKPA GKVLVHSAQG
SQYTSHDWSE FLSAHGLEGS MSRRGNCHDN AVAESFFQLL KRERIKRKIY ATRDDAKMDV
FNYIEMFYNP KRQHSSNDGL SPLEYERQYF NEVKSRLVK
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