Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_A0088 |
Symbol | |
ID | 1172511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004349 |
Strand | + |
Start bp | 67555 |
End bp | 67866 |
Gene Length | 312 bp |
Protein Length | 103 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637346542 |
Product | plasmid stabilization protein ParE, putative |
Protein accession | NP_720419 |
Protein GI | 24376311 |
COG category | [R] General function prediction only |
COG ID | [COG3668] Plasmid stabilization system protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.839855 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGTAA CTTATCATTT AACACCTGAT GCACAGTCTG ATCTGATAGG CATTCACCGC TTTACGTTAG CCCAATGGGG GGCTACTCAG TCAAAGACCT ATTTATCCGG ACTTAAACAA ACGATTCAGC TGCTGGCTGA AACACCCACC CTTGGGAAAA ATAGACCCGA GGTACGCATG AATGTGTTTA GTTTTCCTTA TTCAAGTCAC GTCATCTATT ACATCCAACA TGAGCATCAA TTCGTTGTAT TTGGGATCTT ACATAAAAGT ATGGTTCCAC TTACTCATCT CGCAGAGCGG GAAACCATCT GA
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Protein sequence | MAVTYHLTPD AQSDLIGIHR FTLAQWGATQ SKTYLSGLKQ TIQLLAETPT LGKNRPEVRM NVFSFPYSSH VIYYIQHEHQ FVVFGILHKS MVPLTHLAER ETI
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