Gene SO_A0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_A0088 
Symbol 
ID1172511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004349 
Strand
Start bp67555 
End bp67866 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content43% 
IMG OID637346542 
Productplasmid stabilization protein ParE, putative 
Protein accessionNP_720419 
Protein GI24376311 
COG category[R] General function prediction only 
COG ID[COG3668] Plasmid stabilization system protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.839855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTAA CTTATCATTT AACACCTGAT GCACAGTCTG ATCTGATAGG CATTCACCGC 
TTTACGTTAG CCCAATGGGG GGCTACTCAG TCAAAGACCT ATTTATCCGG ACTTAAACAA
ACGATTCAGC TGCTGGCTGA AACACCCACC CTTGGGAAAA ATAGACCCGA GGTACGCATG
AATGTGTTTA GTTTTCCTTA TTCAAGTCAC GTCATCTATT ACATCCAACA TGAGCATCAA
TTCGTTGTAT TTGGGATCTT ACATAAAAGT ATGGTTCCAC TTACTCATCT CGCAGAGCGG
GAAACCATCT GA
 
Protein sequence
MAVTYHLTPD AQSDLIGIHR FTLAQWGATQ SKTYLSGLKQ TIQLLAETPT LGKNRPEVRM 
NVFSFPYSSH VIYYIQHEHQ FVVFGILHKS MVPLTHLAER ETI