| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_A0085 |
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| Symbol | |
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| ID | 1172508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004349 |
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| Strand | - |
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| Start bp | 65906 |
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| End bp | 66451 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637346539 |
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| Product | ISSod8, transposase |
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| Protein accession | NP_720416 |
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| Protein GI | 24376308 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3316] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0953687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCCTCA ATTTTTCTGG CAGACATTTT CCATCTGATA TCATCATGCA AGCGCTGCGA
TATTACCTTG CTTATAAACT TAGTTACCGT GAAATTGAGG AAATGTTCGC AGAGCGAAAC
ATTCATTTTG ACCACTCAAC ACTGAACCGC TGGGTTATCA AATATGCACC TCTGCTCGAA
GCCATATTCA GGAAGAAAAA ACGTCTAGTA TCTGGCTCGT GGCGAATGGA TGAAACTTAC
ATAAAAATGA AGGGGCAGTG GGTTTACTAT TATCGTGCAG TGGATAAATT CGGCGCGGTG
ATTGATTTTT ACTTGAGTGA AACCCGTGAT GAGAAGGCCG CACACGCTTT TTTCACTAAA
GCTATCAATC AACATGGCTT ACCTGAGAAG GTGGTTATTG ATAAAAGTGG CGCCAATGCT
GCAGCGTTAG ATACTGTTAA CATTCGGCTG TGGCTATCAG GATGTATGCT CTTTATGATT
GAGGTGCTTA CCGTTAAATA TTTGAATAAT ATTGTCGAGC AAAGCCAACC GAAAAGTGAA
GGGTAA
|
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| Protein sequence | MTLNFSGRHF PSDIIMQALR YYLAYKLSYR EIEEMFAERN IHFDHSTLNR WVIKYAPLLE
AIFRKKKRLV SGSWRMDETY IKMKGQWVYY YRAVDKFGAV IDFYLSETRD EKAAHAFFTK
AINQHGLPEK VVIDKSGANA AALDTVNIRL WLSGCMLFMI EVLTVKYLNN IVEQSQPKSE
G
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