Gene SO_A0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_A0060 
Symbol 
ID1172483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004349 
Strand
Start bp49031 
End bp49558 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content41% 
IMG OID637346519 
Productacetyltransferase 
Protein accessionNP_720396 
Protein GI24376288 
COG category[R] General function prediction only 
COG ID[COG3153] Predicted acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0967209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACCA ACTATATTGA CTGTCAGCTA CTAAACAAGA TGGAACGACA ACCGAGCTTT 
TCAAGTTTCG ATTGTGGTGA TCCGTTTCTT GATAGTTTTG CGCCTAAGAA ATTGGCGAAT
GCTGATGCAA ACAATGATTC TCGGGTCTAT GTTGCTGTAG ACGGGGATAT AGGTGTTGGC
TATGCCACGA TGAAAGTTTT TATGCTCAGT AATGACGAGT ATAAAATTTT ATCAGGTAAA
TACCCTCGCC AGGTTCCTGT TGTGATGTTA GACCAAATCG CAGTTGATAA AGCATATCAA
GGCAAAGGAA TTGGTAAGCG CCTTATGCGA AAAGTGCTTG AAGCAACTGT GTTAGTGAAT
GAACTTGCGG CCGCTAAAGG TTTAGCGTTA TGGGCTCACC CTAGAGCAAA AGACTTTTAT
GAGTCATTAG GGTTTGAAGC CATTCCTGAT GCAACGAAAC AAGTACAAGA CGTTGAGTTA
ACACTGATGT TTATTCACGT AGAAACCATT TTGGATGCAT TGAAGTAA
 
Protein sequence
MSTNYIDCQL LNKMERQPSF SSFDCGDPFL DSFAPKKLAN ADANNDSRVY VAVDGDIGVG 
YATMKVFMLS NDEYKILSGK YPRQVPVVML DQIAVDKAYQ GKGIGKRLMR KVLEATVLVN
ELAAAKGLAL WAHPRAKDFY ESLGFEAIPD ATKQVQDVEL TLMFIHVETI LDALK