Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_A0060 |
Symbol | |
ID | 1172483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004349 |
Strand | + |
Start bp | 49031 |
End bp | 49558 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637346519 |
Product | acetyltransferase |
Protein accession | NP_720396 |
Protein GI | 24376288 |
COG category | [R] General function prediction only |
COG ID | [COG3153] Predicted acetyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0967209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTACCA ACTATATTGA CTGTCAGCTA CTAAACAAGA TGGAACGACA ACCGAGCTTT TCAAGTTTCG ATTGTGGTGA TCCGTTTCTT GATAGTTTTG CGCCTAAGAA ATTGGCGAAT GCTGATGCAA ACAATGATTC TCGGGTCTAT GTTGCTGTAG ACGGGGATAT AGGTGTTGGC TATGCCACGA TGAAAGTTTT TATGCTCAGT AATGACGAGT ATAAAATTTT ATCAGGTAAA TACCCTCGCC AGGTTCCTGT TGTGATGTTA GACCAAATCG CAGTTGATAA AGCATATCAA GGCAAAGGAA TTGGTAAGCG CCTTATGCGA AAAGTGCTTG AAGCAACTGT GTTAGTGAAT GAACTTGCGG CCGCTAAAGG TTTAGCGTTA TGGGCTCACC CTAGAGCAAA AGACTTTTAT GAGTCATTAG GGTTTGAAGC CATTCCTGAT GCAACGAAAC AAGTACAAGA CGTTGAGTTA ACACTGATGT TTATTCACGT AGAAACCATT TTGGATGCAT TGAAGTAA
|
Protein sequence | MSTNYIDCQL LNKMERQPSF SSFDCGDPFL DSFAPKKLAN ADANNDSRVY VAVDGDIGVG YATMKVFMLS NDEYKILSGK YPRQVPVVML DQIAVDKAYQ GKGIGKRLMR KVLEATVLVN ELAAAKGLAL WAHPRAKDFY ESLGFEAIPD ATKQVQDVEL TLMFIHVETI LDALK
|
| |