Gene SO_A0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_A0058 
Symbol 
ID1172481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004349 
Strand+ 
Start bp47238 
End bp47987 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content44% 
IMG OID637346517 
Producthypothetical protein 
Protein accessionNP_720394 
Protein GI118725031 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.530734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAT CTAAAGCCGA TAAAGCACGC ATCAAGCGCC AAAAGTTGCG TTCAGCTAAA 
CGCGAAGCTG CGTTACATGT TAAAACGCAG AATACGGCGG TTGGCTCTAA TGCCTACAAA 
GCTAGCCTTG AGGGATTTAA AGCTAAAGGT GCTCGCTTAC CCCGCTATTT TAACGAAGTA 
ATCAATAACG CCCGTAAGCT GATTTACAGC CGCAAGCTTG AAGTTGACGA AGGCGGTATA 
TCTAGAAATA TGTCTGAACG AACTAAGCGC AAGTTGTTCG AAATCGTAGT AACCATGATT 
ACTACGTGCG ATCTTCTTAC TGGCCAAGTC GGTATGGCCA AAAACATCGG TTTCGATACA 
ACGAGCCATG ATTCTTTGAT GTTGGCTCAT GCTAAACGCT GGGGGGAAGC GATCCCGAGC 
TCTACCTGGT ATCGATACAT CGATGTTCTG AAAAAGTCAG GCGTTTTCAC CGTGCAAGAA 
GTTAAAGTTG CAATTGATGA TAACTCAACC GGTGAAGAAA AAACGATTCG TTCAGTAGCG 
GCCTACAAAT GGCTTTCTAC ACGTTTTTTA CAGGCGATAG GTGTTTACTC TGACACGATA 
AGAGCGCAAA TCAAGCAAGC ATATCAAAGA GCCGTGGATA AAGGCTTGTC ATTCACTTGG 
CGGGTTTACA AACGGCAATT ACCAAACAAA CAGCGCTTTA CCCCTGATTT GTTTTTCTCG 
CAATCGTACT CGCAACCCAA AACGCATTAG
 
Protein sequence
MQKSKADKAR IKRQKLRSAK REAALHVKTQ NTAVGSNAYK ASLEGFKAKG ARLPRYFNEV 
INNARKLIYS RKLEVDEGGI SRNMSERTKR KLFEIVVTMI TTCDLLTGQV GMAKNIGFDT 
TSHDSLMLAH AKRWGEAIPS STWYRYIDVL KKSGVFTVQE VKVAIDDNST GEEKTIRSVA 
AYKWLSTRFL QAIGVYSDTI RAQIKQAYQR AVDKGLSFTW RVYKRQLPNK QRFTPDLFFS 
QSYSQPKTH