Gene SO_A0033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_A0033 
Symbol 
ID1172628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004349 
Strand
Start bp25235 
End bp25723 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content49% 
IMG OID637346492 
Producthypothetical protein 
Protein accessionNP_720369 
Protein GI24376261 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAAAG TAACCGGTAT TCCATTTTCA GAGGTGAAAG CGCAGCTTAT GGATAATCCC 
GAGGTTGTCG CGGCCTATGA GCAAGCCGTA CAAGCCGATG AACCGATCCA CATTATTCCA
GTGCAACACA GTGAGGGCGT TATCATGCCA ATCAACAATA TCGTGAGTTG TACGCGCCAA
CCCAATCGGG CCAGTTTTTC CTTTGTGAAT CTGTTTGGTG GCCATCACTA TCCAGTGACG
ATGATTTTTA TGCCCTCTGG CGCGGTGAAT GTCGTTGTCG CGGGTGCGCG GTATCGATGC
CAAGCAAACC AAGTGCAGCG CGTGATTGAT GAGTCAGGGC TTGAGCATGA GGGCTTAGCG
TGTTTGAAAT ATTCGATTGA AGCGGGGGAG TTGAATTTTC ATATTCCCGC TGATGTTCAC
GAGCAGCTTA AAGAGCATCC AGAGTTTCAA AAATGCCGCC TCATCGAATG GGAAGATGAA
GAAATGTGA
 
Protein sequence
MGKVTGIPFS EVKAQLMDNP EVVAAYEQAV QADEPIHIIP VQHSEGVIMP INNIVSCTRQ 
PNRASFSFVN LFGGHHYPVT MIFMPSGAVN VVVAGARYRC QANQVQRVID ESGLEHEGLA
CLKYSIEAGE LNFHIPADVH EQLKEHPEFQ KCRLIEWEDE EM