Gene SO_A0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_A0019 
Symbol 
ID1172615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004349 
Strand
Start bp16733 
End bp17290 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content51% 
IMG OID637346481 
ProductISSod9, DNA-invertase 
Protein accessionNP_720358 
Protein GI24376250 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGATCG GTTATGCAAG AGTATCAACA CAAGATCAGC ACCTAGAACT TCAGCGAGAA 
GCCTTGCTTA AAGCGGGGTG CGAAAAAGTG TTTGAAGATA CAATCAGTGG TACTCGGGCT
GACAGGCTTG GTTTGAGCAA AGCCCTTGAA ATACTGCGCG AAGGGGATAC ATTGGTTGTT
TGGAAGCTGG ATAGATTGGG CCGGTCAGTC AAACAACTGG TAGAGCTGGT CAGCGATCTG
CACAAACAAA ACGTCCAGTT TAAGAGTCTC ACCGATTCTA TCGATACCGG CACGCCATCG
GGCCGATTCT TTTTTCATGT CATGGCAAGC CTCGCAGAGA TGGAACGAGA CTTGATCGTC
GAAAGAACCC GTGCGGGGTT GGACGTTGCC AGACAACTCG GTCGTAAAGG CGGTCGCAAG
CCGAAGATGA CCGACAGCAA GATCGAATCA GCCAAAAAGC TATTAGCCAG TGGAGTCCCC
CCCAAGGATG TGGCTAAGAA TCTTGGCGTG TCGGTTCCTA CGCTATACCG CTGGCTCCCT
GCCTCTGCGC ATGCTTAG
 
Protein sequence
MLIGYARVST QDQHLELQRE ALLKAGCEKV FEDTISGTRA DRLGLSKALE ILREGDTLVV 
WKLDRLGRSV KQLVELVSDL HKQNVQFKSL TDSIDTGTPS GRFFFHVMAS LAEMERDLIV
ERTRAGLDVA RQLGRKGGRK PKMTDSKIES AKKLLASGVP PKDVAKNLGV SVPTLYRWLP
ASAHA