Gene SO_A0008 details

Gene Information

• Locus tag: SO_A0008
• ID: 1172604
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004349
• Strand: +
• Start bp: 7840
• End bp: 8559
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637346470
• Product: hypothetical protein
• Protein accession: NP_720347
• Protein GI: 24376239

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCTGATTA AAAGATATGC ACAGATTTTG TGGATAAGTG GCTTTTTATT AAGCAATACC 
GCGTGTGCAC GTGATCCATG GAACGACAAG GAACAGAAGC CAGATATTAG ACCGTTTGAA 
GTGCCACGGC TGCAGGGTGA CACACAATAT CAAGATCCCA TACCTTCACT CTTACCCGCC 
CCCGAAATCG ATCCCGACTC GATTTATACC GCAGCGTTAA ATTGTTACCC CGAAGAATCT 
AAATTTAAGG TCGATGTGGA TTTAGTCGCG GGCTATCGGC GCGTGAGTGA TCAATATGAC 
ACCAGCGGCT GGCCAGCATT GAGCGAGCAT TACATAGGCG TAGTAGGCAA AATTCCGCTG 
TTATCGGATA GCGAAGATAG CCGCGCCCGG GACCGCGAAT ATTTGCGCCG TACACGTACC 
GCAGAAGCCG TAGCCGGTTT TGCCCAGGCG CTCGCTAATC GCAATTTTGC TTACCGTGAA 
ATAGGGCTTT ATATGGCGCT TGAAGCGCGG GCGATTGTGC GTGTGGGTAA AGGGATAGCG 
CCAACCGAAG AGCAAATAAC CATGATGGAA AAAGTCGCAG AAGCACAGCG CAATGTGACT 
AAGTACAGTG CCGAAGCGGT GCAATTTCGC CTTGCAATTA TTGCCATGTG CGACGACCAA 
AAGGCACCCG TGCTCAATGA TTATTTAAAG CAAATTGCCT TTTTACCTAA AGCTAAATAA 

 

Protein sequence

MLIKRYAQIL WISGFLLSNT ACARDPWNDK EQKPDIRPFE VPRLQGDTQY QDPIPSLLPA 
PEIDPDSIYT AALNCYPEES KFKVDVDLVA GYRRVSDQYD TSGWPALSEH YIGVVGKIPL 
LSDSEDSRAR DREYLRRTRT AEAVAGFAQA LANRNFAYRE IGLYMALEAR AIVRVGKGIA 
PTEEQITMME KVAEAQRNVT KYSAEAVQFR LAIIAMCDDQ KAPVLNDYLK QIAFLPKAK