Gene SO_A0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_A0006 
Symbol 
ID1172602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004349 
Strand
Start bp6037 
End bp6813 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content47% 
IMG OID637346468 
ProductParA family protein 
Protein accessionNP_720345 
Protein GI118725020 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1192] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0843826 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAACGT TAGCAGTGAT AAATCAGAAA GGTGGCGTCG GCAAGACCAC CACAGTGATC 
AACCTATCCG CACAATTAGC GCATGAAGGT AAACGGGTGC TGGTGATTGA TTTAGATCCC
CAGGCTAACC TATCCGTGGT ATTAACGGGC GGTCAATTTG AATTTGAACA CTCGATCACC
GATGTATTCG AGTCCTCGAA AAAGTGCCCC ATCCAACAGG CCATTATGCC AGCGCAGTCT
AATGGTGAAG CAATTCCCAA CCTGTGTATT TGCCCAACGG ATATTCGCCT AAGCCGAGTG
ATTGAACAGA GCCTTACCAA AGTTCACCGT GAACGCATTT TGTTAAAGCA GCTTGAAGCG
ATTGCCAGCG ATTTTGACAT CGTGATCTTA GATTGCCCGC CTAACCTAAG TCTGACATCG
GTTAACGCCA TGATGGCCGC TGATATGTTC CTGATCCCCG TTGATGGTGG TTCATTTTCA
TTAAACGGCT TAGCTGATTT GCTCGATGCA CTTGAAGAAG TCAAAGAAAG CGAGCACGTA
AACTACGCGG TATTCCGTAA CGAATTTGCC AAGGCTAATA AGCTGATTAA CAACTTCCTC
GATGAGCAAT TAGCCTCACT CGAAGGCAAA GTATTAGCGA CGACGATTCG CCGTTCTGAG
GACGTAGGCC AAGCCAGCGT CAGCGGCCAA ACCTTGCTGA ATTACAAGCC TAGCAGCCTC
ACGTTAGCGG ATTATAAGAG CTTGGCTAAA GAAGTCATGC AACGTCTTAA TGTATAA
 
Protein sequence
MKTLAVINQK GGVGKTTTVI NLSAQLAHEG KRVLVIDLDP QANLSVVLTG GQFEFEHSIT 
DVFESSKKCP IQQAIMPAQS NGEAIPNLCI CPTDIRLSRV IEQSLTKVHR ERILLKQLEA
IASDFDIVIL DCPPNLSLTS VNAMMAADMF LIPVDGGSFS LNGLADLLDA LEEVKESEHV
NYAVFRNEFA KANKLINNFL DEQLASLEGK VLATTIRRSE DVGQASVSGQ TLLNYKPSSL
TLADYKSLAK EVMQRLNV