| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_r008 |
|---|
| Symbol | Sp23SA |
|---|
| ID | 1172350 |
|---|
| Type | rRNA |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 271658 |
|---|
| End bp | 274551 |
|---|
| Gene Length | 2894 bp |
|---|
| Protein Length | |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | 640699807 |
|---|
| Product | 23S ribosomal RNA |
|---|
| Protein accession | |
|---|
| Protein GI | |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GGTTAAGCGA CTAAGCGTAT ACGGTGGATG CCTTGGCAGT CAGAGGCGAT GAAGGACGTA
GTAACTTGCG AAAAGCGTTG GCGAGCTAGT AACAAGCATT TGAGCTAACG ATGTCCGAAT
GGGGGAACCC GGCCGCATAA GCGGTCATCA TGTGGTGAAT ACATAGCGAC ATGAGGCAAA
CGAGGGGAAC TGAAACATCT AAGTACCCTT AGGAAAAGAA ATCAACCGAG ATTCCCCTAG
TAGCGGCGAG CGAACGGGGA TTAGCCCTTA AGTCAATGGG GTGTTAGTGG AATGGTCTGG
AAAGTCCAGC GGCACAGGGT GATAGCCCCG TACACGAAAA CTAACCATTG ATGAAAACGA
GTAAGGCGGG ACACGTGACA TCCTGTTTGA ATATGGGGGG ACCATCCTCC AAGGCTAAAT
ACTCCTGACT GACCGATAGT GAACCAGTAC CGTGAGGGAA AGGCGAAAAG AACCCCTGTG
AGGGGAGTGA AATAGAACCT GAAACCGTAT ACGTACAAGC AGTGGGAGCG GTTCTTGAGA
CCGTGACTGC GTACCTTTTG TATAATGGGT CAGCGACTTA CATTTAGTAG CGAGGTTAAG
CGAATAGCGG AGCCGTAGGG AAACCGAGTG TTAACTGCGC GTTGAGTTGC TAGGTGTAGA
CCCGAAACCC GGTGATCTAG CCATGGGCAG GTTGAAGGTT GAGTAACATC AACTGGAGGA
CCGAACCGAC TAATGTTGAA AAATTAGCGG ATGACTTGTG GCTGGGGGTG AAAGGCCAAT
CAAACCGGGA GATATCTGGT TCTCCTCGAA AGCTATTTAG GTAGCGCCTC GAGCGAATAC
CATTGGGGGT AGAGCACTGT TAAGGCTAGG GGGTCATCCC GACTTACCAA CCCTTTGCAA
ACTCCGAATA CCAATGAGTA CTACTCGGGA GACAGACGGC GGGTGCTAAC GTCCGTCGTC
AAAAGGGAAA CAACCCAGAC CGTCAGCTAA GGTCCCAAAG TGTATGTTAA GTGGGAAACG
ATGTGGGAAG GCTTAGACAG CTAGGATGTT GGCTTAGAAG CAGCCATCAT TTAAAGAAAG
CGTAATAGCT CACTAGTCGA GTCGGCCTGC GCGGAAGATG TAACGGGGCT AAACATACCA
CCGAAGCTAC GGGTGCATTT CATTAGAGAT GCGCGGTAGA GGAGCGTTCT GTAAGCCGTT
GAAGGTGAAG GGGTAACCCA CGCTGGAGGT ATCAGAAGTG CGAATGCTGA CATGAGTAAC
GATAAAGGGG GTGAAAAACC CCCTCGCCGA AAGACCAAGG GTTCCTGTCC AACGTTAATC
GGGGCAGGGT GAGTCGACCC CTAAGGTGAG GCCGAAAGGC GTAATCGATG GGAAACAGAT
TAATATTTCT GTACTTCTGC TAACTGCGAT GGAGAGACGG AGAAGGCTAG GCTAGCGCGG
CGTTGGTAGT CCGCGTTTAA GGTGGTAGGC TGATTTCTTA GGCAAATCCG GGAAATCTTA
AGGCTGAGAG CTGATGACGA GTCCCCAAGG GGATGAAGTA GTTGATGCCA TGCTTCCAGG
AAAATCTTCT AAGCTTCAGG TTAGTAGGAA TCGTACCCCA AACCGACACA GGTGGTCGGG
TAGAGAATAC CAAGGCGCTT GAGAGAACTC GGCTGAAGGA ACTAGGCAAA ATGGTACCGT
AACTTCGGGA GAAGGTACGC TCCTGTTGGT GATGAGACTT GCTCTCTAAG CTGACGGGAG
TCGCAGATAC CAGGTGGCTG CAACTGTTTA TCAAAAACAC AGCACTGTGC AAACTCGCAA
GAGGAAGTAT ACGGTGTGAC GCCTGCCCGG TGCCGGAAGG TTAATTGATT GGGTTATCGC
AAGAGAAGCT CATGATCGAA GCCCCGGTAA ACGGCGGCCG TAACTATAAC GGTCCTAAGG
TAGCGAAATT CCTTGTCGGG TAAGTTCCGA CCTGCACGAA TGGCGTAATG ATGGCCACGC
TGTCTCCAGC CGAGACTCAG TGAAGTTGAA ATTGCGGTGA AGATGCCGTA TACCCGCGGC
TAGACGGAAA GACCCCGTGA ACCTTTACTA TAGCTTGGCA CTGAACATTG ACCCTACATG
TGTAGGATAG GTGGGAGACT TTGAAGTTGG AACGCTAGTT CTGATGGAGT CGTCCTTGAA
ATACCACCCT TGTAGTGTTG ATGTTCTAAC TTGGCCCCAT TATCTGGGGT AAGGACAGTG
CCTGGTGGGT AGTTTGACTG GGGCGGTCTC CTCCCAAAGA GTAACGGAGG AGCACGAAGG
TTGGCTAAGT ACGGTCGGAC ATCGTACGGT TAGTGCAATG GCATAAGCCA GCTTAACTGC
GAGACAGACA CGTCGAGCAG GTACGAAAGT AGGTCATAGT GATCCGGTGG TTCTGAATGG
AAGGGCCATC GCTCAACGGA TAAAAGGTAC TCCGGGGATA ACAGGCTGAT ACCGCCCAAG
AGTTCATATC GACGGCGGTG TTTGGCACCT CGATGTCGGC TCATCACATC CTGGGGCTGA
AGTCGGTCCC AAGGGTATGG CTGTTCGCCA TTTAAAGTGG TACGCGAGCT GGGTTCAGAA
CGTCGTGAGA CAGTTCGGTC CCTATCTGCC GTGGGCGTTG GATGATTGAG GGGAGTTGCT
CCTAGTACGA GAGGACCGGA GTGAACGAAC CGCTGGTGTT CGGGTTGTCA TGCCAATGGC
ATTGCCCGGT AGCTATGTTC GGAATCGATA ACCGCTGAAA GCATCTAAGC GGGAAGCGAG
CCCCAAGATG AGTCATCCCT TGGACTTTAA GTCCACTAAA GAGCCGTTCG AGACTAGGAC
GTTGATAGGT CAGGTGTGTA AGCGTTGTGA GGCGTTGAGC TAACTGATAC TAATGACTCG
AGAGGCTTAA CCAT
|
|---|
| Protein sequence | |
|---|
| |