Gene SO_4757 details

Gene Information

• Locus tag: SO_4757
• Symbol: gidB
• ID: 1172333
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 4967069
• End bp: 4967689
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637346461
• Product: 16S rRNA methyltransferase GidB
• Protein accession: NP_720273
• Protein GI: 24376229
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division
• TIGRFAM ID: [TIGR00138] 16S rRNA methyltransferase GidB

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTTATCTG CCCAGTTAGA GGCCTATTTA GCCGAAATTA ATCTGCCCGC CACCGCTGAG 
CAGAAAAAAC AACTGCTTGA TTTTGTTGGC ATGCTCAACA AATGGAATAA AGCCTATAAC 
TTAACGTCTG TAAGGGATCC TGAGATCATG CTTGTCCGTC ATATTATGGA CAGCTTAGTG 
GTTTCGAAAC ATCTGCAAGG TGATCGCTTT ATTGATGTGG GCACTGGACC TGGGCTTCCA 
GGTATTCCGC TGGCGATTAT GAATCCAGAT AAAACCTTTG TACTACTCGA TAGCTTAGGT 
AAACGCATTC GTTTTCAAAA GCAGGTCGCC TTTGAATTAG GTATTCATAA TGTTAGCTCA 
ATAGAGAGTC GAGTTGAGGC CTATCAACCA GAGCAAAAGT TTGATGGTGT GCTGAGCCGT 
GCCTTTGCGT CAATCCATGA TATGTTGACA TGGTGCCATC ATTTACCCGC TGAACATGGG 
CAATTTTATG CGCTTAAGGG GCAATTGAGC GATGACGAAA TGCAACACAT TCCTACTGGC 
TTTGCGATAA CAGAAACGAT CGAACTCAAG GTTCCTAGAC TCGATGAGCA AAGACATTTA 
CTCAAAATAA TCAAAGAATA A 

 

Protein sequence

MLSAQLEAYL AEINLPATAE QKKQLLDFVG MLNKWNKAYN LTSVRDPEIM LVRHIMDSLV 
VSKHLQGDRF IDVGTGPGLP GIPLAIMNPD KTFVLLDSLG KRIRFQKQVA FELGIHNVSS 
IESRVEAYQP EQKFDGVLSR AFASIHDMLT WCHHLPAEHG QFYALKGQLS DDEMQHIPTG 
FAITETIELK VPRLDEQRHL LKIIKE