| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4749 |
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| Symbol | atpA |
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| ID | 1172325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4960964 |
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| End bp | 4962505 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637346453 |
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| Product | F0F1 ATP synthase subunit alpha |
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| Protein accession | NP_720265 |
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| Protein GI | 24376221 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
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| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTGA ATTCCACTGA AATCAGCGAT CTGATTAAGC AGCGGATCGA GCAGTTCGAA
GTCGTTAGCG AATCTCGTAA CGAAGGAACT ATCGTTGCGG TAAGTGACGG CATTATCCGC
ATCCACGGCC TAGCCGATGT GATGCAAGGT GAAATGATCG AACTGCCTGG TAGCCGTTTT
GCAATCGCGT TGAACCTTGA ACGTGATTCT GTCGGTGCCG TAGTAATGGG CCCTTATGCT
GATTTAGCAG AGGGCGTAAA AGTTAAAACT ACTGGCCGTA TTCTGGAAGT TCCAGTCGGT
CGTGGCCTGT TAGGCCGCGT AGTTAACACT CTGGGTGAGC CTATCGACGG TAAAGGAGCG
ATCGACAACG ATGGTTTCTC TCCTGTTGAA GTGATTGCTC CAGGTGTTAT CGAACGTAAG
TCAGTAGATC AACCAGTTCA AACTGGTTAT AAAGCCGTTG ACGCTATGAT CCCAATCGGT
CGTGGCCAAC GTGAATTGAT CATTGGCGAC CGTCAAACTG GTAAAACAGC GATGGCGATC
GATGCAATCA TCAACCAACG TGATTCTGGC ATTAAGTGCG TGTATGTAGC GGTAGGCCAA
AAGGCTTCTA CTATTGCTAA CGTAGTACGT AAGCTAGAAG AACACGGTGC ATTAGCTAAC
ACTATCGTTG TGGTTGCAAC AGCTTCTGAA GCTGCAGCAC TGCAATACTT AGCACCGTAC
TCTGGTTGTG CTATGGGTGA ATACTTCCGC GACCGCGGTG AAGATGCTCT GATCGTATAC
GATGACCTGT CTAAGCAAGC TGTTGCTTAC CGTCAGATCT CGTTACTGCT GAAGCGTCCA
CCAGGCCGTG AAGCTTATCC TGGTGACGTA TTCTATCTAC ACTCTCGTTT ATTAGAGCGT
GCTTCACGCG TAAACGAAGA GTATGTAGAA AAGTTCACTA AAGGTGCAGT AACAGGTAAA
ACTGGTTCTT TAACCGCGCT GCCTATTATT GAAACTCAGG CGGGTGACGT ATCTGCATTC
GTACCGACCA ACGTAATTTC GATTACTGAC GGTCAGATCT TCCTTGAGAC CGATCTGTTT
AACTCTGGCT TACGTCCAGC GGTTAACCCA GGTATTTCTG TTTCTCGTGT TGGTGGTGCG
GCTCAGACTA AGATCATCAA GAAACTGTCT GGTGGTATCC GTACCGCTCT TGCACAGTAT
CGTGAACTTG CTGCGTTCTC ACAGTTTGCA TCTGATCTTG ACGATGCAAC TCGTGCTCAA
CTAGAGCATG GTGTGCGTGT TACCGAACTG ATGAAGCAAA AACAATATGC TCCTATGAGC
GTAGCCGCTC AAGCTGTGTC AATTTTCGCA GCTGAAAAAG GTTACCTGAA GGGCGTTGAG
CTGAAAAAAG TTGGTGATTT CGAAGCCGCT CTGCTCTCGT ACATGAACAG CGAGCATGCT
GCTTTAATCA AGCTTATCAA CGAGACTGGC GATTATAACG CCGATATCGA AGCTGAATTA
AAAGCTGGCC TCGACAAGTT CGTAGCAACC CAAACCTGGT AA
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| Protein sequence | MQLNSTEISD LIKQRIEQFE VVSESRNEGT IVAVSDGIIR IHGLADVMQG EMIELPGSRF
AIALNLERDS VGAVVMGPYA DLAEGVKVKT TGRILEVPVG RGLLGRVVNT LGEPIDGKGA
IDNDGFSPVE VIAPGVIERK SVDQPVQTGY KAVDAMIPIG RGQRELIIGD RQTGKTAMAI
DAIINQRDSG IKCVYVAVGQ KASTIANVVR KLEEHGALAN TIVVVATASE AAALQYLAPY
SGCAMGEYFR DRGEDALIVY DDLSKQAVAY RQISLLLKRP PGREAYPGDV FYLHSRLLER
ASRVNEEYVE KFTKGAVTGK TGSLTALPII ETQAGDVSAF VPTNVISITD GQIFLETDLF
NSGLRPAVNP GISVSRVGGA AQTKIIKKLS GGIRTALAQY RELAAFSQFA SDLDDATRAQ
LEHGVRVTEL MKQKQYAPMS VAAQAVSIFA AEKGYLKGVE LKKVGDFEAA LLSYMNSEHA
ALIKLINETG DYNADIEAEL KAGLDKFVAT QTW
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