| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4743 |
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| Symbol | |
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| ID | 1172320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4954248 |
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| End bp | 4956320 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637346448 |
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| Product | TonB-dependent receptor, putative |
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| Protein accession | NP_720259 |
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| Protein GI | 24376215 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGATGC CTGTTATGGC AGAAGCGCCA AACGATGCAA ACATTGAACG TATTAATGTA
ACAGGCCGTA CTTTTAACGA TTATAAAGTC GGTAGTGCAT CTGGCGCTAT GCGTGGCGAT
ATTGACTTAA TGGATACCCC ACAGTCTGTT AATGTGATCC CTGACTTTGT TACCGATGAG
CAATTAGCAA CAAACCTTGC CGAAGTATTG GTAAACGATT CAAGTGTGAC AGCGGGAACC
ACCCGTTGGA ACCGTCAAGT CTTCAGTATC CGTGGCTTCG AACTCGATTC GGGTAATGGT
TATCTCATCA ATGGCCACCA GCAATGGTCT CATTACGTTC AACCTATCGA AACGCTGCAG
CAGGTTGAAG TGCTTAAAGG CCCTTCAAGT ATGCTGTATG GTCAATCAGG ACCTGGCGGT
TTGGTGAATA TGGTCACCAA AAAGCCGACC TACGATTCAA TGCTCGATTT AGGTTTTGAT
ACTGATGGCT ACGGCTCTAC CCGTGCGCAG TTAGATGCGG GTGGCAGCTT AAACGAAGCG
CAGAGCATTC GTTATCGTGG TGTGTTAGTC AAACAAGACA CTAAATACTG GCGCGAATAT
TCAACTACCG ATGAAAACCA AGAGCGTGAT CGTTGGTTAG GATATTTGAA TTTGGAATTT
GATATCAGTG ATGATTTGCT GTTATCGGTT AAGTATGACC ATACCCAAGA CAAAGCGGGC
ATCGATGCGG GTGGCTGGTT AGATAAACAA GGCAATGTGA TTGGCGAGCG TAAAACCGTA
TGGGATGCGC CTTGGGCCTT TACCGATAAT ACCGTCTCAA ATTTAGGTGC TGATCTAACT
TGGCAAATGA CTAACGACTG GAAAGTGAAA GTCGGCTACA ACGATCAACA ATTTAATCGC
CAACGTTTAG ACTCTGCGCC AAGTTTGATT GAAGGCTCTG AAGATCCATT CAAAGATGGT
TATAACATCA AACCATTCGA TCGTTATGAC GATTGGCAGC ATAAAACGGC CTATGTGGAT
TTCACGGGTG AATTTTCTTT GGCAGGAATG GAGCATCAAT TCCTTATTGG TGCTAACTAT
TTAGACTATT TCTACCAGCA GCAAATTCAG AAAGGCAAAA GTCAGCGTGT AATTCCTGGG
CAACCAATTA TTCAGCAAGA TCTTGATTAT CATCAAGGTC AGCTAAGCAA CCCAAGTGAA
TACAAGTATT ACGGTTTCTA TTTGCAGGAT TTAATGACAT TAAATGAGCA ATGGAAGTTG
CTTGCTGGTG TACGGTATGA CGAACAGAAA AAAGATACCG CTGGCGGTAA CAGCTATGCC
GTATCGCCTA AATTTGGGGT GATTTATTCG CCTATGGATA ATGGCAGTAT TTATGTTAAC
TATTCAAAAA GCTTTACCCC GCAAGGATCT GTAACCAGTT CCGAAGATGT GAATCAAGGG
GCTAATCTAA AACCTGAGTA TGGCACTCAG TATGAATTGG GAACGAAGTG GGAGCTCTTT
AATGACAGTC TACTGCTGAC TGCTGCTCTG TTTGATATAA CCGTGTCCAA TGTCACAACA
GTGCTAGATA TTCCAGTAAC AAGTGATGGT GATAAAACAA TAACCACTCA AGGTGGTGAG
CAACATCACC GTGGTTTTGA AGTTGGTGCC CAAGGCCAGT TAGGTGATAG CTGGTTTGTG
ACTTCATCTA TGATGTATTT AGATGCGGAA TATAATACGG GTGCAGGCAA AATCGGTGGC
AAGAATTTAG ATGGTAAAAC TCCTATTGAT GCCCCTAAAT GGTCTGCCAA TATCTGGACT
CGTTACGAAG TAACTGACAA CTTTGCGATG AACTTTGGCG CTATCTACGT TGGTGAGCGT
TTTGCTAATG ATGTAAATAC CATTACCAAA GATGGTTACG TCCGTTTTGA TGTTGGTGCT
GCCTATACTA CGGATATTAT GGGTAAAGAC GTTAGCATCC GTGCAAACGT GAGAAACCTG
TTTGATACTG AATACTTAGA TGGCGGTAGC GATAAGATGG TCACTATCGG CCAAGATCGT
AACTTCAGCG TGGCACTTGA AGCTAAGTTC TAA
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| Protein sequence | MAMPVMAEAP NDANIERINV TGRTFNDYKV GSASGAMRGD IDLMDTPQSV NVIPDFVTDE
QLATNLAEVL VNDSSVTAGT TRWNRQVFSI RGFELDSGNG YLINGHQQWS HYVQPIETLQ
QVEVLKGPSS MLYGQSGPGG LVNMVTKKPT YDSMLDLGFD TDGYGSTRAQ LDAGGSLNEA
QSIRYRGVLV KQDTKYWREY STTDENQERD RWLGYLNLEF DISDDLLLSV KYDHTQDKAG
IDAGGWLDKQ GNVIGERKTV WDAPWAFTDN TVSNLGADLT WQMTNDWKVK VGYNDQQFNR
QRLDSAPSLI EGSEDPFKDG YNIKPFDRYD DWQHKTAYVD FTGEFSLAGM EHQFLIGANY
LDYFYQQQIQ KGKSQRVIPG QPIIQQDLDY HQGQLSNPSE YKYYGFYLQD LMTLNEQWKL
LAGVRYDEQK KDTAGGNSYA VSPKFGVIYS PMDNGSIYVN YSKSFTPQGS VTSSEDVNQG
ANLKPEYGTQ YELGTKWELF NDSLLLTAAL FDITVSNVTT VLDIPVTSDG DKTITTQGGE
QHHRGFEVGA QGQLGDSWFV TSSMMYLDAE YNTGAGKIGG KNLDGKTPID APKWSANIWT
RYEVTDNFAM NFGAIYVGER FANDVNTITK DGYVRFDVGA AYTTDIMGKD VSIRANVRNL
FDTEYLDGGS DKMVTIGQDR NFSVALEAKF
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