Gene SO_4741 details

Gene Information

• Locus tag: SO_4741
• Symbol: glmS
• ID: 1172318
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 4951368
• End bp: 4953197
• Gene Length: 1830 bp
• Protein Length: 609 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637346446
• Product: glucosamine--fructose-6-phosphate aminotransferase
• Protein accession: NP_720257
• Protein GI: 24376213
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains
• TIGRFAM ID: [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing)

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGCGGAA TCGTTGGCGC TGTGGCGCAA AGGGATGTGG CCGAAATTCT GGTCGAAGGT 
TTACGTCGTT TAGAATATCG TGGATATGAC TCTGCTGGTG TTGCCGTGAT CCACAATGGC 
GAACTCAATC GCACGCGCCG CGTTGGTAAA GTGCAGGAAC TGTCTGCTGC ACTCGAAACC 
GACCCGTTAG CGGGCGGCAC TGGGATTGCG CATACACGCT GGGCGACCCA CGGTGAGCCA 
AGCGAGCGTA ATGCTCACCC GCATTTATCT GAAGGTGATA TTGCCGTTGT ACACAATGGT 
ATTATCGAAA ACCACCATAA ACTGCGCGAA ATGCTTAAAG AACACGGCTA CCACTTCAGC 
TCAGATACCG ATACCGAAGT GATTTGCCAC TTAGTTCATC ACCAATTAAA AACAAACGAC 
AGCTTACTTG CTGCGGTACA AGCCACTGTT AAACAACTTG AAGGCGCCTA TGGCACTGTA 
GTTATCGACC GTCGTGATAG TGAGCGTATG GTCGTGGCCC GTTCTGGCAG CCCGCTGGTG 
ATTGGTTTTG GTCTAGGTGA AAACTTTGTC GCTTCTGACC AACTGGCGCT GCTGCCTGTG 
ACCCGCTCTT TCGCCTTTTT AGAAGAGGGT GACGTGGCCG AAGTGACTCG TCGCACTGTG 
AGCATTTTCG ATGTGCATGG CAATAAAGTT GAGCGCGAAG TTAAAGAGTC AGAAATCACC 
CACGATGCTG GCGACAAAGG CGAATATCGC CACTATATGC TCAAAGAAAT CTATGAGCAG 
CCACTGGCAC TGACGCGTAC TATTGAAGGC CGCATCGCCA ACAAACAAGT GCTCGACACG 
GCTTTTGGTG ATAATGCCGC TGAATTCTTA AAAGATATTA AACACGTACA GATTATTGCT 
TGTGGTACTA GCTACCATGC GGGCATGGCG GCACGTTATT GGTTAGAAGA TTGGGCGGGT 
GTTTCTTGTA ACGTCGAAAT TGCCTCTGAA TTCCGCTACC GCAAGTCGCA TTTATTCCCC 
AACAGCCTGT TGGTGACCAT TTCTCAATCC GGTGAAACTG CCGATACGCT TGCAGCGATG 
CGCCTAGCCA AAGAAATGGG CTATAAGGCG ACACTGACCA TCTGTAACGC GCCTGGCTCT 
TCTTTGGTGC GTGAGTCAGA TATGGCGTAC ATGATGAAAG CGGGTGCTGA GATTGGCGTT 
GCTTCGACCA AGGCCTTTAC TGTACAGCTG GCAGGTTTGT TAATGTTGAC TGCGGTGATC 
GGTCGCCATA ATGGCATGTC TGAGCAAATG CAGGCCGAGA TCACCCAAAG CCTACAGTCT 
ATGCCTGCTA AAGTGGAGCA AGCATTAGGC TTAGATGATG CGATTGCAGA ACTGGCAGAA 
GACTTTGCTG ACAAACACCA TGCGTTATTC CTTGGTCGTG GCGATCAATA CCCGATTGCG 
ATGGAAGGCG CGCTTAAACT TAAAGAAATC TCTTATATTC ATGCAGAGGC TTATGCCTCT 
GGCGAATTAA AACATGGCCC ACTGGCCTTG ATTGACGCCG ATATGCCCGT GATTGTGGTG 
GCGCCAAACA ACGAATTATT AGAGAAGCTG AAATCTAATG TTGAAGAAGT GCGTGCCCGT 
GGCGGTTTAA TGTATGTGTT TGCCGATGTG GATGCGGAGT TCGAGTCTGA CGACACCATG 
AAAGTGATCC CTGTACCGCA CTGCGATATT TTTATGGCGC CACTGATTTA CACTATCCCA 
TTACAGTTGC TCTCTTACCA TGTTGCCTTA ATCAAGGGCA CCGATGTGGA TCAGCCGCGC 
AACCTTGCTA AATCGGTGAC GGTGGAATAA 

 

Protein sequence

MCGIVGAVAQ RDVAEILVEG LRRLEYRGYD SAGVAVIHNG ELNRTRRVGK VQELSAALET 
DPLAGGTGIA HTRWATHGEP SERNAHPHLS EGDIAVVHNG IIENHHKLRE MLKEHGYHFS 
SDTDTEVICH LVHHQLKTND SLLAAVQATV KQLEGAYGTV VIDRRDSERM VVARSGSPLV 
IGFGLGENFV ASDQLALLPV TRSFAFLEEG DVAEVTRRTV SIFDVHGNKV EREVKESEIT 
HDAGDKGEYR HYMLKEIYEQ PLALTRTIEG RIANKQVLDT AFGDNAAEFL KDIKHVQIIA 
CGTSYHAGMA ARYWLEDWAG VSCNVEIASE FRYRKSHLFP NSLLVTISQS GETADTLAAM 
RLAKEMGYKA TLTICNAPGS SLVRESDMAY MMKAGAEIGV ASTKAFTVQL AGLLMLTAVI 
GRHNGMSEQM QAEITQSLQS MPAKVEQALG LDDAIAELAE DFADKHHALF LGRGDQYPIA 
MEGALKLKEI SYIHAEAYAS GELKHGPLAL IDADMPVIVV APNNELLEKL KSNVEEVRAR 
GGLMYVFADV DAEFESDDTM KVIPVPHCDI FMAPLIYTIP LQLLSYHVAL IKGTDVDQPR 
NLAKSVTVE