Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4734 |
Symbol | |
ID | 1172313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 4939626 |
End bp | 4941920 |
Gene Length | 2295 bp |
Protein Length | 764 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637346438 |
Product | sensory box protein |
Protein accession | NP_720250 |
Protein GI | 24376206 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGCCA TTGTGCAATC GGCACAAGCA TTACAGGATA TAGAACGCAT TGAGCAGGAG GTCTCTCTCG CGACGTTAGA TATGAATGTT ATGGTCTATA TCTTGCTCGA TGCAAACAGC CGGATTCGAT TTGCTAATCA TGCAGTTTGG CGCGATAGCA ATGCGATTGA AGTGATAGAT GGGTACGATG TAATTCAGCA CCATGCCGTA GTGCAATCAG GGTTGGCGAG TATTTCTGTT AATCCCGAAA GGTTGTCTAT TCAAGCCTAT TATCCTGTTG AAGCCCAGTA TCCTGGAGCG ACAGAGTTGG TTTATCTCGA GTCTGATTTA GCTCCTTTAG TAGCTAAAGC CTCAACTGAG TTACAACAAC GATTTATGCG TGTATGGGGA CTTGGCGCCC TGCTGCTTAT TGGCTTTACC TGCGTGTTAT ATTATTTGTT GATACGTCCA TTTAAGTTGT TAAGTAAATC GGCTAAGCAT GTCGGTACAC CGGAATTTAC AATACAAGTA CCTTGGAGTG CTGCTGAGGT TTTATCTTTA CAGACGAGTC TCCAACAGGT GCATGAGCGC TTAGGTCGAG CGGTTAAGCA GCTTAATGAT AGTGAACAGC GCTGGTTGTT TGCCGTTGAA GGCTCGCGCA ATGGTATTTG GGATTGGGAT CTTCGAACTG GTGAAGTATT TCTCTCCGAT CGATGGAAGG AAATGATTGG TTACCTTCCA GATGAACTTG AAGGGGCATT CCAGACGTGG GAGGCGCGTT TACATCCAGA TGATAAGCAA GCTGTGTTGA ATTGTCTGGA TGAATATGTG AGCGGCAAAA CAAAGGAGTT TGAGAGTGTG CATCGCTTAC TACATCGCGA TGGCCATTAT GTTTGGGTTT TCGACCGTGG CATGTTAGTT GACTGGGATC ATTTGGGGCG ACCTACCCGA ATGATTGGGA TTCATGTTGA TGTGTCTGAG AGTGAGAAAA ACCATGCTGC TATTGCGGAG TTAGTTAAGC AATCTGCAAG TGGCCACCGA ATGCTTCCTG AAGCGTTTAT GGAACAATTG TCTCAATACC TGTCTCAACG AAATCGTGCA GGTTATTGGG GGGCTTTATT ATTCGTTAAT GTGGATACTC ATGATATTAG TGATTCGCTG TCAACCCATG AACTAGAGCG ATTACTGTCT CAATTAGGCG CAAGACTTTC GAGCTATTTT ACTGAGAATA TTGTTGTTGC ACATATTGAA TTTGGTAATT TTGCATTTTT AGTCAAAGAT TTAGCTGTTG ATGCCGAAAT GGCTGGGCGC CGTGCCTTGG CCTTAGCAAC CGAGTTAAGG CAAATCACGA TGCGTCCTTT CCATTATGGT GAGCATCATT TTAGTTTGGT TGCGAATCTG GGTATTTGCT TATTAGATTC GGTTGAAACA CTTGCACCAG AACTTGTGGT TCGGCGTGCT CAACTCGCAA TGGAGCATGG TAAGTCATCG GAACATGCAG GTTGTGCTTT CTATCATCCA GACTTAGCGC GTGCATTGGA TCCTGAACCG TCATTACTCA ATGCATTGCA ACGGGCCATT ACTGACAATC AGCTCTCATT GATGTTCCAG CCCGTTGTGG ATGTGTATGG CAAGATAGAG TCTGCTGAAG TCTTATCTCG CTGGTCTTTA GCCAATGGAG AAATCGTCCC TGTTGCTCAA TTTATTAGCT TAGCTGAGCA AAATGGATTG GTTGCCTCGC TTGATTTAAA TGTTACCGAG CGAGTTTGCC AGTTAGTCAA ACAGTTTAGG CAACTTGGCA TTACGTTGCC GCGTTTGACG TTGAATATAA GTACCTTATC TTTCTGCCAA GCTGATTTTA TTGAACAATT TATTGCTGTA GTTCGTTCCT ATGAGCTTGA TGATAAGCAA CTGGGCGTTG AACTTGCTGA GAGTGTGTTC CTTACATCTA AAGCATTTGT TGAGCCACGG ATTATTCAGT TAGTCGAGGC AGGGATTGCT ATTACGTTAG ATAACTTTGG TGCCGGGCAG AGTGCCTTAA GTTGCCTACA TAACTACCCG CTAACTGAGG TGAAGTTAGA TGTGCATTGT GCAGTAAGCT TGTTGAATGA TGCGAGTTGG AACCAAGCAC TTATTCAAGC GGTACAACCT TTTAAACTGC CGATAGTGGC TAAAGGCGTT GAATCGGTTC AGCAACAACA GCTATTTACC ACCTTAGGAT GTACCCATTT CCAAGGTTAC AATATCGCTC GCGCCTTGAG TTTGAATGAT TTTAAACAGC TTGTTTGTCC ACGTCCCTTG TTGCGTAGCG TTTAA
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Protein sequence | MQAIVQSAQA LQDIERIEQE VSLATLDMNV MVYILLDANS RIRFANHAVW RDSNAIEVID GYDVIQHHAV VQSGLASISV NPERLSIQAY YPVEAQYPGA TELVYLESDL APLVAKASTE LQQRFMRVWG LGALLLIGFT CVLYYLLIRP FKLLSKSAKH VGTPEFTIQV PWSAAEVLSL QTSLQQVHER LGRAVKQLND SEQRWLFAVE GSRNGIWDWD LRTGEVFLSD RWKEMIGYLP DELEGAFQTW EARLHPDDKQ AVLNCLDEYV SGKTKEFESV HRLLHRDGHY VWVFDRGMLV DWDHLGRPTR MIGIHVDVSE SEKNHAAIAE LVKQSASGHR MLPEAFMEQL SQYLSQRNRA GYWGALLFVN VDTHDISDSL STHELERLLS QLGARLSSYF TENIVVAHIE FGNFAFLVKD LAVDAEMAGR RALALATELR QITMRPFHYG EHHFSLVANL GICLLDSVET LAPELVVRRA QLAMEHGKSS EHAGCAFYHP DLARALDPEP SLLNALQRAI TDNQLSLMFQ PVVDVYGKIE SAEVLSRWSL ANGEIVPVAQ FISLAEQNGL VASLDLNVTE RVCQLVKQFR QLGITLPRLT LNISTLSFCQ ADFIEQFIAV VRSYELDDKQ LGVELAESVF LTSKAFVEPR IIQLVEAGIA ITLDNFGAGQ SALSCLHNYP LTEVKLDVHC AVSLLNDASW NQALIQAVQP FKLPIVAKGV ESVQQQQLFT TLGCTHFQGY NIARALSLND FKQLVCPRPL LRSV
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