| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4718 |
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| Symbol | |
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| ID | 1172297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4922525 |
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| End bp | 4923907 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637346422 |
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| Product | sigma-54 dependent response regulator |
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| Protein accession | NP_720234 |
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| Protein GI | 24376190 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGA TAGATAATAA CCTCAAGCCC CTTCCTTCCG CTGTGTCGGT CCTGATCGTT
GATGACGAAC CAGGGATGCG CAGTTTTTTA AATAAGGCAC TCTCGAAAAA ATTCGCCTTA
GTCGAAACTG CGGGCAGTAT TGAAGATGCT GAGCAGCTAC GTAGTCGCTG TCACTTCGAC
TTATTGATTG TCGATATTCG TTTACCCGGT CGCTCGGGTA TTGAGTGGAG CGAAGCGTTA
GATGAACAAG GTCGACGTTC CGATGTAATT TTTATGACCG GCTATGCGGA TTTAGAAGTC
GCGATTAAAG CACTGCGCGC TGGCGCGTCT GACTTTATTA TGAAGCCATT CCACCTTGAG
CAGATGATGT CTGCGGTTGA CCGCTGTATT GAGCGCCGCT TGCTTCGCCG TGAAAACTTA
ATGCTGCGCC GTGAAGTGTC TATTGGCTAT TCCTCCACCA TTATTGGTAG CAGCGATGCG
ATGAAGTCGG TTAAGCAAGT GATTGAACGT GTCGCACCAA CTAATGCGGT TGTGTTAATC
CAAGGGGAAT CGGGCACGGG TAAAGAGTTA GTTGCGCGGC AATTACATTT ACTCAGCGGT
CGCCAAGGGC CTTTTGTCCC TGTTAACTGT GGCTCGATAG CGCCTGAATT GCTTGAAAGT
GAACTCTTTG GCCATACAGC AGGGGCCTTT ACTGGCGCCA AGGGTAATCG CGAAGGCTTA
TTTAGTTTTG CCTCCGGCGG TACGATTTTC CTCGATGAAA TTGGCGAGAT GCCGCTCAAA
ATGCAAACCG CGCTGCTCAG GGTGCTGGAG CAGAAGGCGA TTCGCCCAGT GGGCAGTGAA
AAGGAAGTCA ATATTGATGT CCGAGTGATC GCGGCAACTA ACCGTACATT GGTGGATGAA
GTTGAGGCGG GTAACTTCCG GCGCGATCTC TATTATCGTC TGAATGTGCT TGATATTTTA
ATTCCACCGC TGCGTGATCG TCCGGAAGAT GTGGTCGAAT TGACCCACCA TTTTACCCGC
CAATTGGCTG CAGAGTTAGG CGTGCGCGAA GTGGTGTGGA GCCATGAGGA TATGGTGAAA
CTGCAACAAC ATGAGTGGCC GGGTAATATT CGCGAGCTAC GCAATATGAT TGAGCGCTGT
ATTCTGCTTG GTAAGCCTCC GGCAGAGTAT TGGAAGCAAC AGGTGAAAAC TGAATCCTTG
GCTTCCCAAG GTTATCCATT AGATTGGCCA CTAAAAGAAG TGGAAAAACA TCATGTGACT
AGCGTAGTGG ATTTGCATTC TGGTAATAAA TCCGCAGCAG CTCGGGACTT AGGGGTTTCC
CGTAAGACTT TAGATCGCAA GTATAAAGAA TGGTTTGGCG TTAGCGACGA GCAGGAGTTT
TAA
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| Protein sequence | MSQIDNNLKP LPSAVSVLIV DDEPGMRSFL NKALSKKFAL VETAGSIEDA EQLRSRCHFD
LLIVDIRLPG RSGIEWSEAL DEQGRRSDVI FMTGYADLEV AIKALRAGAS DFIMKPFHLE
QMMSAVDRCI ERRLLRRENL MLRREVSIGY SSTIIGSSDA MKSVKQVIER VAPTNAVVLI
QGESGTGKEL VARQLHLLSG RQGPFVPVNC GSIAPELLES ELFGHTAGAF TGAKGNREGL
FSFASGGTIF LDEIGEMPLK MQTALLRVLE QKAIRPVGSE KEVNIDVRVI AATNRTLVDE
VEAGNFRRDL YYRLNVLDIL IPPLRDRPED VVELTHHFTR QLAAELGVRE VVWSHEDMVK
LQQHEWPGNI RELRNMIERC ILLGKPPAEY WKQQVKTESL ASQGYPLDWP LKEVEKHHVT
SVVDLHSGNK SAAARDLGVS RKTLDRKYKE WFGVSDEQEF
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