| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4717 |
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| Symbol | |
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| ID | 1172296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4920395 |
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| End bp | 4922524 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637346421 |
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| Product | sensor histidine kinase |
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| Protein accession | NP_720233 |
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| Protein GI | 24376189 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCTTTTT TTACTCACTT TTTTGGGGTT AGTTGGCAGC AAATGCAGGC TAAAGTGCGT
TATCGCATTC TGATCCTGAC TTTATTGCCG ATTTTGCTCA CCTTAGTGAG TTTAGTGTTT
ATCACGATTT ACTGGAATAT CAGTTATACA GGTAAGCAAC TGTTTATGAA GGTAAAAGCT
GATTTGGCTG TCGCTGAGAA CACTCTGCAG CAGGTGCAAG TTCGGCAGGA AAAACAGCTA
GAAAGGGTGA TGACTTCATG GACATTCCAG AATGATTTTA GACCCATCCT CAGTGGCGCC
TTAGCCCATA GGGCGAGCAT AGATACCTTT CTGCATGAGC AAAAAAAGCA GCTCGATTTA
GACTTTTTAC GGCTGGTCAG TGTCGCTGAA GCGGCAGCAG ATCCTGATTT ACGACAGATT
TTACCAAAAA TTGGTGGAAT GTTGCCCTAT TCTGGACTGA TGGTGCTATC CCGTGAGCGC
TTAGCTCGGA TTGACCCAGA TTTAGCGCAA AGGGCTAGTA TTCCCTTGCT GGCGACTTTG
CGGGCGCAAA GTCCGGATAA ACAAGTTGAA GAGCGGGGTT TACTCAGTCG TAGCTTGCTG
CCAATCCCAG ATTCTGAAGG TAAAGTGGCA TGGTATCTCG ACGGTGGAGT GTTGTTTAAT
CGAGATACTC GCATCGTCGA CCATATCCGC GATCTCGTCT ACGACAAGGG CACCTTGCCC
GAACGCTCAA TTGGTACTGT GACGATTTTC CTCGATAACA TTCGGGTATC GACCAACGTC
CCTTTACACT TTTTTCCACA GCCGAATGAG TCCCAAGGAC GCGCACTGGG TAGTTTGGTC
TCGGAGGAGG TGCGGGAAAA AGTGTTAAAT CACGGGGAGT TATGGGTTGA CAGGGCGTTT
GTGTACAACG ACTGGTTTAT TTCTGCCTAT GCGCCGTTAG AAGATATCCG TGGACAGCGA
GTTGGGATGA TCTATACCGG TTTTTCCGAG TCGCCATTTA TTCATAACTA CCTACTTAAT
ATCATTGAGT TAGGCACCAT TCTAATGTTA GTGCTGCTTA TTTCTGGTTT GCTGGTTTAC
CGCGGCGCCT ACAGTCTATT GCAGCCGATT GAGCGTATTC ACCATGTGGT GCAAGCCGTG
CAGTCTGGGC GCAATGTGCG AATTGGTGCC TTGGGGCTAG ATAGGGATAA CGAGCTATCG
AACCTCGCTG AGCAGTTCGA CCGCATGCTG GATTTATTGC AGCGGCGTAA TGCGCAGATC
CAAGCCGCCG CCGAACAGCT AGAAATGAAG GTCGAAGAGC GGACTCGTAG CCTGCAAGAT
AAGACGTTAG AACTACAGCG CAACGTCGCC TTACTCAATG AGACACGCCA GCAGTTGGTG
ACCAACGAAA AGTTGACCGC TCTAGGTGAG TTAACCGCCG GTATTGCCCA CGAAATCAAT
AATCCGACCG CTGTTATCCT CGGCAACATG GAGTTACTGC GCTATGAGCT GGGTGATAAA
GCCGAAGTCG TAAAAGAAGA AATTGATCTA GTTATTCAAC AGGTTGGACG TATTAGCACC
ATTATTCGAA GCTTACTGCA ATATAGCCGT CCGGGTGAGT TCAATGCTCC GTTAGAGATG
CATCCCATTA CGCCTATTAT CGAGGAAATG CTGGTATTAG TGCGACATTC GATTCAAAAA
CAAGAAGTTG TGCTGATAAC TGAATTGAAT GCCAGTTGCC CTGTGCAGGT CAATCGCCCG
CAGTTACTGC AAGTGTTGAT TAACCTTGTG GTGAATGCTG CCCATGCGAT GGATGGCAAG
GGACGAATTT GGGTTCGCAC CTATGATTGG GTGCAGCAGG ATATAGCGAT TGGTGTCAAA
ATCGAGGTTG AAGACGAAGG TTCAGGGATT GAGCCTGAGC AATTAGGGCG GATTTTTGAT
CCTTTCTATA CCACTCGTAA AGATGGTACT GGCCTTGGAT TATCACTCAG TTATGGCATT
ATCAAGCGTA TTGGTGGCAC GATTGAGGTG AGTTCGGTGT TGGGTAAAGG CTCAATCTTT
ACGATTGGTT TGTACCATGA GGCGAAGGAA GACCATCAAA ACAATCCCTA CGACGGCTTA
CATTTTTCGG GAAATCACCC TGAAAGTTAA
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| Protein sequence | MSFFTHFFGV SWQQMQAKVR YRILILTLLP ILLTLVSLVF ITIYWNISYT GKQLFMKVKA
DLAVAENTLQ QVQVRQEKQL ERVMTSWTFQ NDFRPILSGA LAHRASIDTF LHEQKKQLDL
DFLRLVSVAE AAADPDLRQI LPKIGGMLPY SGLMVLSRER LARIDPDLAQ RASIPLLATL
RAQSPDKQVE ERGLLSRSLL PIPDSEGKVA WYLDGGVLFN RDTRIVDHIR DLVYDKGTLP
ERSIGTVTIF LDNIRVSTNV PLHFFPQPNE SQGRALGSLV SEEVREKVLN HGELWVDRAF
VYNDWFISAY APLEDIRGQR VGMIYTGFSE SPFIHNYLLN IIELGTILML VLLISGLLVY
RGAYSLLQPI ERIHHVVQAV QSGRNVRIGA LGLDRDNELS NLAEQFDRML DLLQRRNAQI
QAAAEQLEMK VEERTRSLQD KTLELQRNVA LLNETRQQLV TNEKLTALGE LTAGIAHEIN
NPTAVILGNM ELLRYELGDK AEVVKEEIDL VIQQVGRIST IIRSLLQYSR PGEFNAPLEM
HPITPIIEEM LVLVRHSIQK QEVVLITELN ASCPVQVNRP QLLQVLINLV VNAAHAMDGK
GRIWVRTYDW VQQDIAIGVK IEVEDEGSGI EPEQLGRIFD PFYTTRKDGT GLGLSLSYGI
IKRIGGTIEV SSVLGKGSIF TIGLYHEAKE DHQNNPYDGL HFSGNHPES
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