| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4713 |
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| Symbol | |
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| ID | 1172292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4916550 |
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| End bp | 4917908 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637346417 |
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| Product | menaquinone-specific isochorismate synthase, putative |
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| Protein accession | NP_720229 |
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| Protein GI | 24376185 |
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| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1169] Isochorismate synthase |
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| TIGRFAM ID | [TIGR00543] isochorismate synthases |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCTGCTC ACGCCCTGTC TGAAGACCTC AAGTCTCTCA TCGACAAACT TATTCAAATG
AAACAGGTTC CCGCAACGGA GCCGATAGTG CAGTTATCCT TAAAAACTGT CTCTATCCCT
TTGATTTCAT GGCTGGCATC ACAAACCCTC TATCCGCGTA TCTACTGGCA TGGACGTGAT
AAGGTTGAAG AAGTTGCGGC CATTGGTGCA TGTAAAGACT TCAAATTCGA AACTGGCGTC
GACGATAAGG CATTAGCCAG TGTTTACGAG CAGCAACGCA TGTTGTCTAG CAATCCTGAC
ATTCGTTACT ATGGTGGTGT TGCCTTTGAT CGCAGTATCG AATCTTGGCC CGAGTTTGGT
AATACCCGCT TTGTGCTACC CAGAATTGAG TTTAGACGCA GCGCAAATCA GTTTAGTTTG
CGGGTGAATC TCAATTTTGC CGATAATAAT CCGATTGATG AAATCGACCT CGCTATCGCC
GCCATTGAAG CTGTTATGCC TGCGCGTCCC TTGGCACCGC CAAACAAACT CACCTTAGTA
AGTCGTCAGG ATATTCCTGA CTTTCCACAC TGGAAAACCT TAGTCGAACA AGTGATTGAG
CCTAAGTTTA ATCAAGATAC CCCTAAGGTT GTCCTTTCTC GTTTAACCGA GCTTGAGGTT
AATGAACAGG TTGACCCTTG GATGGTTTTA GCCTGTTGGC AAGGACGTAA CCCAAACAGT
TTCCAATTTG GGTTCCAATT TAGCCCTGAT CGTACTTATA TCTCCTGTTC GCCAGAGCGC
TTATTCCGCC GCAGCCAGCA AGAACTCTTT ACCGAGGCGT TAGCAGGCAC CACAGTGCGG
GGATTGAACC AAGAGGAAGA TGTGGCGCTA GCCAATGCGC TGCTCGAAGA CAACAAGAAT
AGCGTCGAGA ATCAGTTGGT CCGTCGCCAT ATAGTCAGTA TGCTCACGCC GCTGAGCCAA
TATGTGGGTG CCGAAGAAGA AGCCACCATC TTTAAGTTGA ATCATATTCA ACATTTGCAC
CGCGCAATTC GTGCAGAGTT AAAACCCGGA GTCAGCGACT TTCAACTGCT ACAAGCACTG
CATCCCACCC CCGCAGTGGG CGGTCTCCCT AGAGAGTCGG CAATGACGTT TATTCGGCAA
CGTGAAGGTT ATATGCGTGG CTGGTACGCA GGTGCCTGTG GGTATTTTAA TAAAGACGAA
AGTGAGTTTT CGGTTGCAAT TCGCAGCGCG TTGATTGAGC CAGGTAAAAT TAATTTGTTT
GCAGGGGCAG GCATTATTGC AGGTTCCGAT CCAGAGGCTG AATGGCAAGA GCTTGAAAAC
AAGCTAGCGA CTATTATGTC AATTTTGATT GAGCTATAG
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| Protein sequence | MPAHALSEDL KSLIDKLIQM KQVPATEPIV QLSLKTVSIP LISWLASQTL YPRIYWHGRD
KVEEVAAIGA CKDFKFETGV DDKALASVYE QQRMLSSNPD IRYYGGVAFD RSIESWPEFG
NTRFVLPRIE FRRSANQFSL RVNLNFADNN PIDEIDLAIA AIEAVMPARP LAPPNKLTLV
SRQDIPDFPH WKTLVEQVIE PKFNQDTPKV VLSRLTELEV NEQVDPWMVL ACWQGRNPNS
FQFGFQFSPD RTYISCSPER LFRRSQQELF TEALAGTTVR GLNQEEDVAL ANALLEDNKN
SVENQLVRRH IVSMLTPLSQ YVGAEEEATI FKLNHIQHLH RAIRAELKPG VSDFQLLQAL
HPTPAVGGLP RESAMTFIRQ REGYMRGWYA GACGYFNKDE SEFSVAIRSA LIEPGKINLF
AGAGIIAGSD PEAEWQELEN KLATIMSILI EL
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