Gene SO_4708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4708 
Symbol 
ID1172287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4911024 
End bp4911974 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content46% 
IMG OID637346412 
Producthypothetical protein 
Protein accessionNP_720224 
Protein GI24376180 
COG category[S] Function unknown 
COG ID[COG2855] Predicted membrane protein 
TIGRFAM ID[TIGR00698] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTTT CATCGATATT CTCACAACTT AAAGATCCCC ATCGCCTTAT TTTTATCTGC 
GCTGCGTTGC TATGTCTCAC GCCATTTATG TCATCTCCCA TGGCGCTTGT GCTCGGCTTT
ACCTTAGCTA GCCTTGGGTG GGTACCTAAA GACTGGAATA TCGCGGCACT CACCAAAAAA
TTACTGTCTT ATTCGATTAT TGGCCTAGGC TTCGGCATTA ACTTAACCGC TGCGATTGAG
GCCAGTAGCC ACAACTTAGG GCTCATTATC GGCTCAATTA TTTTCACGCT GATTTTAGGC
TTTATAGTCA CTCGAGCACT GAAGTTTGAC CCTATTACAG GGCACTTGAT TGCCTCCGGC
ACTGCCATCT GTGGAGGAAG TGCTATTGCG GCCGTGGCAC CTGCTGTTAA TGCCAAAGCC
GATCAAACCG CTACGGCATT AGCCTGCGTG TTTGTACTTA ATTCGGTAGC TTTGTTTTTA
TTCCCCGCCC TTGGGCATTT ACTCAATATG AGCCAATATG ATTTTGGCGT GTGGAGTGCT
ATTGCGATTC ATGACACTTC CTCCGTGGTG GGCGCTGCCT CCGCCTACGG TGATGAAGCG
CTAAAAACTG CAACGACCAT TAAACTGGCA CGCGCACTGT GGATTATTCC GATTGCCCTT
GTCAGTGCAC TGATCTTTGG TGGTGATAAG CGCAAGCTTA ACCTACCGTA TTTTATCGGT
TTTTACTGTT TAGCCATCGC TATCGCCCAT TGGTTACCGC AATTCCAACC GCTCTACAAC
ACCTTATTTA TGGTATCGAA GCACACGCTT GTGCTGTGTC TGTTCTTGAT TGGCGCAGGG
ATTACAGTAC AAAAAATGCG TGCAAGTGGC CCAAAACCAT TGCTGTTAGG GGTAATTTTG
TGGATGGCGA TCGGGGTCAC ATCTTTAGCT TATATTCTGT ATTTTCAATA A
 
Protein sequence
MNFSSIFSQL KDPHRLIFIC AALLCLTPFM SSPMALVLGF TLASLGWVPK DWNIAALTKK 
LLSYSIIGLG FGINLTAAIE ASSHNLGLII GSIIFTLILG FIVTRALKFD PITGHLIASG
TAICGGSAIA AVAPAVNAKA DQTATALACV FVLNSVALFL FPALGHLLNM SQYDFGVWSA
IAIHDTSSVV GAASAYGDEA LKTATTIKLA RALWIIPIAL VSALIFGGDK RKLNLPYFIG
FYCLAIAIAH WLPQFQPLYN TLFMVSKHTL VLCLFLIGAG ITVQKMRASG PKPLLLGVIL
WMAIGVTSLA YILYFQ