Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4708 |
Symbol | |
ID | 1172287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 4911024 |
End bp | 4911974 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637346412 |
Product | hypothetical protein |
Protein accession | NP_720224 |
Protein GI | 24376180 |
COG category | [S] Function unknown |
COG ID | [COG2855] Predicted membrane protein |
TIGRFAM ID | [TIGR00698] conserved hypothetical integral membrane protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATTTTT CATCGATATT CTCACAACTT AAAGATCCCC ATCGCCTTAT TTTTATCTGC GCTGCGTTGC TATGTCTCAC GCCATTTATG TCATCTCCCA TGGCGCTTGT GCTCGGCTTT ACCTTAGCTA GCCTTGGGTG GGTACCTAAA GACTGGAATA TCGCGGCACT CACCAAAAAA TTACTGTCTT ATTCGATTAT TGGCCTAGGC TTCGGCATTA ACTTAACCGC TGCGATTGAG GCCAGTAGCC ACAACTTAGG GCTCATTATC GGCTCAATTA TTTTCACGCT GATTTTAGGC TTTATAGTCA CTCGAGCACT GAAGTTTGAC CCTATTACAG GGCACTTGAT TGCCTCCGGC ACTGCCATCT GTGGAGGAAG TGCTATTGCG GCCGTGGCAC CTGCTGTTAA TGCCAAAGCC GATCAAACCG CTACGGCATT AGCCTGCGTG TTTGTACTTA ATTCGGTAGC TTTGTTTTTA TTCCCCGCCC TTGGGCATTT ACTCAATATG AGCCAATATG ATTTTGGCGT GTGGAGTGCT ATTGCGATTC ATGACACTTC CTCCGTGGTG GGCGCTGCCT CCGCCTACGG TGATGAAGCG CTAAAAACTG CAACGACCAT TAAACTGGCA CGCGCACTGT GGATTATTCC GATTGCCCTT GTCAGTGCAC TGATCTTTGG TGGTGATAAG CGCAAGCTTA ACCTACCGTA TTTTATCGGT TTTTACTGTT TAGCCATCGC TATCGCCCAT TGGTTACCGC AATTCCAACC GCTCTACAAC ACCTTATTTA TGGTATCGAA GCACACGCTT GTGCTGTGTC TGTTCTTGAT TGGCGCAGGG ATTACAGTAC AAAAAATGCG TGCAAGTGGC CCAAAACCAT TGCTGTTAGG GGTAATTTTG TGGATGGCGA TCGGGGTCAC ATCTTTAGCT TATATTCTGT ATTTTCAATA A
|
Protein sequence | MNFSSIFSQL KDPHRLIFIC AALLCLTPFM SSPMALVLGF TLASLGWVPK DWNIAALTKK LLSYSIIGLG FGINLTAAIE ASSHNLGLII GSIIFTLILG FIVTRALKFD PITGHLIASG TAICGGSAIA AVAPAVNAKA DQTATALACV FVLNSVALFL FPALGHLLNM SQYDFGVWSA IAIHDTSSVV GAASAYGDEA LKTATTIKLA RALWIIPIAL VSALIFGGDK RKLNLPYFIG FYCLAIAIAH WLPQFQPLYN TLFMVSKHTL VLCLFLIGAG ITVQKMRASG PKPLLLGVIL WMAIGVTSLA YILYFQ
|
| |