Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4688 |
Symbol | |
ID | 1172270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 4887469 |
End bp | 4888200 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637346395 |
Product | glycosyl transferase, group 2 family protein |
Protein accession | NP_720204 |
Protein GI | 24376160 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATTTCAG TTGTCATCCC CGCAAAAGAC GAGGTGGGCA ATATTGGCCC ATTAATGAAA GAGATATGCC AAGCCCTGCA AGGGGTGACT GAGTTTGAAA TTCTGGTCGT CGATGACGGT AGCCAGGATG ACACCTTTGG TGAAGTTATT CATACCGCTG AACTGATGCT GTGCAATGCA AAAGCCATTC GTCACGAGCG CAGTACAGGC CAAAGCACCG CGATATCTAC AGGCGTTTTA CATGCGCGCG GTCAATATAT CGTGACGTTA GATGCCGATG GGCAAAATGA TCCCGCCGAC ATTCCCGCTA TGCTGGCACA ACTGCCGCAG ATCCATGCTG AACATTTTTG TATCGCGGGC TACCGTAAAA ATCGCAAGGA CACGGCATGG AAGCGATTCC AATCTCGCTT TGCTAATAAA GTTCGCGATG CACTGTTACA TGATGGTGTG CCCGACACCG GCTGTGGCTT AAAACTCTTC CCCCGCGAAA CCTTCCTGCG CATGCCTTAC TTCGACCATA TGCACAGATA TATCCCAGCA TTAGTGCGCC GAATGGGGGG AGAAGTATTT ATTTCTGTCG TAAATCATAG GGATCGCCAA CTAGGGGTGT CTAAATATAC GGCATGGAAT CGTGTCTGGG TCGGCATTGT CGACATTATG GGCGTAATCT GGCTTGGGCG CAGGGCGAAA ATCGCTAAGG TCGCCCGTAG CGAAACCCGC TGGCACGATT AA
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Protein sequence | MISVVIPAKD EVGNIGPLMK EICQALQGVT EFEILVVDDG SQDDTFGEVI HTAELMLCNA KAIRHERSTG QSTAISTGVL HARGQYIVTL DADGQNDPAD IPAMLAQLPQ IHAEHFCIAG YRKNRKDTAW KRFQSRFANK VRDALLHDGV PDTGCGLKLF PRETFLRMPY FDHMHRYIPA LVRRMGGEVF ISVVNHRDRQ LGVSKYTAWN RVWVGIVDIM GVIWLGRRAK IAKVARSETR WHD
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