Gene SO_4686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4686 
Symbol 
ID1172268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp4885039 
End bp4886046 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content49% 
IMG OID637346393 
ProductNAD dependent epimerase/dehydratase family protein 
Protein accessionNP_720202 
Protein GI24376158 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACT TAGTCACAGG CGCGGCAGGG TTTATCGGCG CCAACGTCAG TAAGCGCCTC 
TGCGCAATGG GCCATGAGGT GGTCGGTATT GATAATCTCA ATGACTACTA TGATGTGGCG 
CTCAAGTTAG CTCGACTCGC ACCGCTCGAA GCATTAAGCA ACTTTCATTT TATCAAACTG 
GATCTCGCCG ATAGAGAAGG CATCGCAAAA CTGTTTGCAC AACAGGGCTT TCAACGGGTT 
ATCCATCTTG CCGCGCAAGC CGGAGTGCGC TACTCCCTAG ATAACCCCCT TGCTTATGCC 
GATAGCAATC TTGTCGGTCA CCTTACAATT TTAGAAGGTT GTCGCCACCA TAAGATTGAA 
CACCTTGTGT ATGCTTCTTC GTCTTCGGTT TATGGATTGA ATCAAAAAAT GCCGTTTTCG 
ACCGAGGACA GCGTCGATCA TCCGATTTCC CTCTACGCGG CAACCAAAAA AGCTAACGAA 
TTGATGTCGC ACACTTACTC GCATTTGTAC CAGCTACCCA CAACAGGTTT ACGCTTTTTC 
ACCGTGTATG GCCCTTGGGG GCGACCCGAT ATGGCCTTGT TTAAATTTAC CAAAGCGATT 
CTCGCCGGTG AAACGATTGA TGTGTATAAC CATGGCGATC TTAGCCGTGA TTTTACCTAT 
ATCGATGATA TCGTTGAGGG CATTATTCGG GTACAAGACA AGCCACCCAG TCCAACTCCA 
GACTGGCGTG TTGAAACGGG GACGCCAGCC AACAGCAGCG CGCCCTATCG CGTATTCAAC 
ATAGGTAATG GCAGCCCAGT GCAATTGCTC GACTTTATTA CCGCACTCGA GCGCGCGCTA 
GGCATCGAGG CGAAAAAGCA ATTTTTACCC ATGCAGCCCG GCGATGTGCA TGCCACATGG 
GCCGATACCG AAGATCTATT TAAGGCCGTG GGATACAAAT CCCAAGTTGA TATTGATACT 
GGCGTGGCAA AATTTGTGGA TTGGTACCGC AATTTTTACG CGCAATAA
 
Protein sequence
MKYLVTGAAG FIGANVSKRL CAMGHEVVGI DNLNDYYDVA LKLARLAPLE ALSNFHFIKL 
DLADREGIAK LFAQQGFQRV IHLAAQAGVR YSLDNPLAYA DSNLVGHLTI LEGCRHHKIE 
HLVYASSSSV YGLNQKMPFS TEDSVDHPIS LYAATKKANE LMSHTYSHLY QLPTTGLRFF 
TVYGPWGRPD MALFKFTKAI LAGETIDVYN HGDLSRDFTY IDDIVEGIIR VQDKPPSPTP 
DWRVETGTPA NSSAPYRVFN IGNGSPVQLL DFITALERAL GIEAKKQFLP MQPGDVHATW 
ADTEDLFKAV GYKSQVDIDT GVAKFVDWYR NFYAQ