| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4682 |
|---|
| Symbol | |
|---|
| ID | 1172264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 4881325 |
|---|
| End bp | 4882395 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637346389 |
|---|
| Product | glycosyl transferase, group 1 family protein |
|---|
| Protein accession | NP_720197 |
|---|
| Protein GI | 24376154 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TCGCCATTTT TTGCCATAAC TTTTTCTCGA ATGGCACGGT CAAAATTGCC
TTATCTCAGG CCGAAGTGCT GCAGGAAGCC GGGCAAGATG TTCACCTCTT TGTGTTCCAT
AAAGAGGGAG ATTTTATGCC GCCAGAAAAT GTGACGATTC ATTACCTGTA TGACGCCGGC
CAAAAGCCAA GCCTACAGGA ACAAAGACAA CACCTGAAGG CCAAGGTGGC CGAAGCGGAA
CAATCAGGTA AGTTCTCGCT ATTTTTAAGT AACTCGACCG ACTGCGATGT AGTTGTATCG
GGTTGCGACT TCGAACCCTG CTACTACTTT TGCCATTGCG CCCTTAAGCA AGAGCTATTG
ATGGAATTAA AGCGCGGTCC AGTGCATTTC TGGCGCCGCT GGAAAAAAGC CAAGGCACTG
ATAGGCAAAA AAATCATCAC AGTTTCGAAT GGTATTGCAG ACGAACTAAG AGCCACTTCT
TGGCTCAAGC CGCAAAGCGT CCAGACAATC TACAATCCCT TTAGATTAGA GGAAATCCGC
AAGAAGACTC AGGAAGTTAT TGCCGAAATC CCAAACGTGC CTTATATGAT CCATGTCGGC
CGCGTGACAC GGCAAAAGCG CCACGATATT TTGTTTAAGG CACTTAGGGA TATGCCAACA
GCCCCTAAGC TTGTCCTGCT GTGCAACCGC CCCAAGAAGG CACGCAAACT GGCCAAGAAA
TACGGTGTCG AACACAGAAT CATCACTCCA GGGTTTCAAC ACAATCCCTA CGCCTGGATT
GCCAAAGCCG AGTTGATGTT ACTCAGCTCA GATTTTGAAG GCTTACCGAC CGTTGTAATT
GAGTCTTTAG CCTGTGGTAC GCCTGTCGTC AGTACTGATT GCCCACACGG GCCCAATGAA
ATTCTCACAG GGCATTTAGC ACAATATCTC GTCCCCGTTC GCCAACCCGC GCTGCTGGCG
CAAAAGGCAC TAGAGTGCTT AGCCTCACCA CCTGCTTTAG ACAATCTAGA AATATTAAAG
GCAGTAGACA GCCAATATAT TGCCGCTCAA TATATTAACT TAGCGCAATA A
|
|---|
| Protein sequence | MKKIAIFCHN FFSNGTVKIA LSQAEVLQEA GQDVHLFVFH KEGDFMPPEN VTIHYLYDAG
QKPSLQEQRQ HLKAKVAEAE QSGKFSLFLS NSTDCDVVVS GCDFEPCYYF CHCALKQELL
MELKRGPVHF WRRWKKAKAL IGKKIITVSN GIADELRATS WLKPQSVQTI YNPFRLEEIR
KKTQEVIAEI PNVPYMIHVG RVTRQKRHDI LFKALRDMPT APKLVLLCNR PKKARKLAKK
YGVEHRIITP GFQHNPYAWI AKAELMLLSS DFEGLPTVVI ESLACGTPVV STDCPHGPNE
ILTGHLAQYL VPVRQPALLA QKALECLASP PALDNLEILK AVDSQYIAAQ YINLAQ
|
|---|
| |