Gene SO_4674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4674 
Symbolkbl 
ID1172256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp4871990 
End bp4873183 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content49% 
IMG OID637346381 
Product2-amino-3-ketobutyrate coenzyme A ligase 
Protein accessionNP_720189 
Protein GI24376146 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01822] 2-amino-3-ketobutyrate coenzyme A ligase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCTCAA CCTCATTCTA CGCACAAATT AATCAACAGC TTGCTGATGT TAAAGCCGAA 
GGTTTATATA AAAGCGAGCG CATTATTGCT TCACCGCAAC AGACTGCCAT TCAAGTTAAT 
CACCAAGAAG TTGTTAACTT TTGCGCTAAC AACTATCTAG GCCTAGCCAA TCATCCAGAA 
CTCATCAAAG CCGCCCAACA AGGTTTAGAT AGCCACGGCT TTGGTATGGC GTCAGTACGC 
TTTATTTGCG GCACCCAAGA CATTCACAAA CAGCTCGAAG CCAGCCTGAG TGAGTTCCTC 
GGCATGGAAG ACACTATTTT GTATTCTTCA TGCTTTGACG CCAATGCAGG CTTGTTTGAA 
ACCCTGTTAG ATGCCGAAGA TGCGATTATC TCCGACGCCT TAAACCATGC CTCAATCATC 
GATGGTGTGC GTTTATGTAA GGCCAAACGT TTCCGTTACG CTAACAACGA TATGGCGGAT 
TTAGAGACGC AATTGATCGC CGCCAAAGCA GCGGGTGCGC GCAATATTTT GATCGCCACT 
GACGGCGTGT TCTCAATGGA CGGCGTAATC GCCAACCTGC AAGGAGTGTG TGACTTAGCC 
GATAAATACG GCGCACTTGT GATGGTTGAC GACTCTCATG CTGTCGGTTT TGTTGGCCAA 
AATGGTCGCG GCTCCCACGA ACACTGCGGC GTGATGGGTC GTGTCGACAT CATCACCGGC 
ACCTTAGGCA AAGCCTTAGG CGGTGCATCA GGCGGTTTCA CTTCAGGTAA AAAAGAAGTC 
ATCGACTGGT TACGTCAACG CTCTCGCCCA TACCTGTTTT CTAACTCATT AGCGCCTTCG 
ATTGTGACAG CGTCTATCCA TGTGTTAGAA ATGCTCAAAT CAGGCCAAGC GCTACGCGAA 
TCGGTATGGG AAAACAGCCG ATATTTCCGT GAAAAAATGT CCGCGGCAGG CTTTACCTTA 
GGCGGTGCCG ACCACGCGAT TATCCCAGTG ATGATTGGCG ATGCCAAACT GGCAAGCGAC 
TTCGCTAACC GCTTATTAGC AGAACATATC TACGTGATTG GCTTCTCCTT CCCTGTGGTA 
CCAAAGGGAC AAGCCCGTAT CCGTACGCAA ATGTCGGCGG CTCACACCCG TGAACAACTC 
GACAAAGCGA TTGAAGCCTT TACCCGTATT GCTAAAGAAA TGGCGATTAT TTAG
 
Protein sequence
MASTSFYAQI NQQLADVKAE GLYKSERIIA SPQQTAIQVN HQEVVNFCAN NYLGLANHPE 
LIKAAQQGLD SHGFGMASVR FICGTQDIHK QLEASLSEFL GMEDTILYSS CFDANAGLFE 
TLLDAEDAII SDALNHASII DGVRLCKAKR FRYANNDMAD LETQLIAAKA AGARNILIAT 
DGVFSMDGVI ANLQGVCDLA DKYGALVMVD DSHAVGFVGQ NGRGSHEHCG VMGRVDIITG 
TLGKALGGAS GGFTSGKKEV IDWLRQRSRP YLFSNSLAPS IVTASIHVLE MLKSGQALRE 
SVWENSRYFR EKMSAAGFTL GGADHAIIPV MIGDAKLASD FANRLLAEHI YVIGFSFPVV 
PKGQARIRTQ MSAAHTREQL DKAIEAFTRI AKEMAII