Gene SO_4670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4670 
SymbolelbB 
ID1172252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4868974 
End bp4869630 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content46% 
IMG OID637346377 
Productisoprenoid biosynthesis protein with amidotransferase-like domain 
Protein accessionNP_720185 
Protein GI24376142 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3155] Uncharacterized protein involved in an early stage of isoprenoid biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TCGCAGTATT ACTCAGCGGG TGCGGTGTTT TCGATGGAAC AGAGATCCAT 
GAATCGGTTT TAACCCTATT ATCTCTATCG AAAGCCGGCG CTCAATATCA GTGTTTTGCT
CCTGATATCA ATCAGATGCA TGTCGTTAAT CACTTCACAG GCGAAGCAGA TAACACGGCG
ACGCGAAATG TGCTGGTTGA ATCAGCGCGT ATTGCCCGTG GTGATATAAA GGCAACCACA
GAACTCGATA TCACTGCCTT TGATGCGTTA ATTATCCCCG GTGGTTTTGG GGCGGCGAAA
AACCTGTGTA ACTTTGCAAC TAATGGTAGT GAGTGCGAGG TTCATCCACT CGTCACTGAT
TTTATTAATG AATTTATTCT TGCGAAAAAG CCCGTGGGCT TTATTTGTAT CGCACCTATG
ATGATCCCAC GTTTATACGG ACATGGCGCA AAGGGCACTA TTGGTAATGA TGTGGATACG
GTCGCGGCAT TTAATCTTAT GGGTGGCAGC CATCACGCAG CGACAGTGCA TGATATCGTG
GTGGATGAAG CGAATAAGAT TGTCAGTACT CCCGCATATA TGCTGGCGGG TAATATTGCA
GAGGCCCACT CAGGGATTGA AAAGCTCGTC GCTAAAGTGT TGCAACTAGT TAAATAA
 
Protein sequence
MKKIAVLLSG CGVFDGTEIH ESVLTLLSLS KAGAQYQCFA PDINQMHVVN HFTGEADNTA 
TRNVLVESAR IARGDIKATT ELDITAFDAL IIPGGFGAAK NLCNFATNGS ECEVHPLVTD
FINEFILAKK PVGFICIAPM MIPRLYGHGA KGTIGNDVDT VAAFNLMGGS HHAATVHDIV
VDEANKIVST PAYMLAGNIA EAHSGIEKLV AKVLQLVK