| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4669 |
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| Symbol | polA |
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| ID | 1172251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4865820 |
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| End bp | 4868588 |
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| Gene Length | 2769 bp |
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| Protein Length | 922 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637346376 |
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| Product | DNA polymerase I |
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| Protein accession | NP_720184 |
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| Protein GI | 24376141 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGACCA TAGCCAATAA CCCACTTGTT CTTGTGGATG GATCTTCTTA TTTATACCGC
GCCTATTATG CGCCTCCTCA TCTGACAAAC TCAAAGGGCG AAGCAACTGG GGCAGTTTAT
GGCGTAGTCA ATATGCTCCG CAGTTTATTG AGCCGTTACC AGCCTAGCCA TATTGCCGTG
GTATTTGACG CTAAAGGCAA GACATTTCGC AATGACTTAT ACCAAGAGTA CAAAGCGCAT
CGCCCACCCA TGCCCGATGA TTTACGCTCA CAAATCGAGC CGCTACACCG TATTATTCGC
GCCTTAGGCT TGCCCCTCAT TTCCATACCC GGCGTAGAGG CAGATGATGT CATTGGCACT
ATTGCTCGCC GAGCGAGCCG CGAGAATCGC GCTGTGCTCA TTAGTACGGG TGATAAAGAT
ATGGCGCAAT TGGTTGATGA AAATATCACG CTAATCAACA CCATGACAGA TACCATCATG
GGGCCAGAAG AAGTCGCAGC CAAATATGGT GTAGGCCCAG ACAGAATTAT CGATTTCTTA
GCGCTGATGG GCGATAAGGC GGATAACATT CCTGGTTTAC CAGGTGTTGG CGAAAAAACC
GCTTTAGCCA TGCTCACGGG TGCCGGAAGC GTGGCTAATC TACTTGCTGA ACCTGAAAAA
GTCTCTGAAT TAGCTTTTAG GGGCTCAAAA ACGATGGCGG CGAAGATCAT CGATAATGCT
GACATGCTAA GACTTTCCTA CGAACTGGCC ACCATTAAAA CCGATGTGGA ACTTGAGCAA
GATTGGCATG AGCTTACCGC CAAACCCGCA GATCGAGACG AACTGATCAA ATGCTACGGC
GAAATGGAGT TTAAGCGCTG GCTTGCCGAA ATTTTAGATA ATAAAGCACC AGCAACCATA
GCGACGGCGA CTACCACAGT AGAAACCGAA GCAGACACTA CGCCAAGTCT CGCACTTGAA
ACCCAATACG ACACGATTTT GACCGAAGCT CAGCTTGATG AGTGGATTGC CAAGCTAAAA
CAAGCATCAC TGTTCGCCGT GGATACCGAG ACCACGAGCC TTGACTATAT GGTCGCCGAA
CTGGTTGGCA TGTCCTTCGC CGTGGAAGCG GGTAAAGCTG CTTACCTGCC TTTAGCCCAC
GATTATGTTG GCGCACCTCA ACAATTAGAT AAGCAGTTTG CGCTCGAAAA ATTACGCCCC
ATTTTAGAAG ATGCCAAGCT TAAAAAAGTC GGTCAAAACC TTAAATATGA CATCAGTGTA
TTGGCCAACG CGGGCATTAC ACTCCAAGGT GTTGCGTTTG ACACCATGCT CGAATCCTAT
GTGTTTAATT CTGTTGCTTC ACGCCATGAT ATGGACGGTT TAGCACTCAA ATACCTAGGC
CATAAAAATA TCGCCTTTGA AGATATTGCT GGCAAAGGAG CGAAACAGCT GACCTTTAAC
CAAATTTCGT TAGAAACAGC TGCTCCCTAT GCGGCGGAAG ATGCAGATAT TACGCTACGC
CTACATCAAC ACCTGTGGCC AAGGCTCGAA AAAGAAGCTG AATTAGCATC GGTCTTTACA
GATATCGAAC TGCCACTGAT CCATATTCTG TCTGATATTG AGCGCCAAGG TGTCTTTATC
GATAGCATGT TGCTCGGTCA ACAGAGTGAA GAACTCGCGC GTAAAATCGA TGAGCTTGAA
ACTAAAGCCT ATGATATTGC AGGTGAAAAA TTCAACTTAA GCTCCCCAAA ACAGCTTCAA
GTACTATTTT TTGAAAAGCT GGGCTATCCG GTCATCAAAA AGACACCTAA GGGCGCACCA
TCCACCGCCG AAGAAGTGCT GGTCGAATTA GCATTGGATT TCCCTCTACC AAAGGTGATC
TTAGAGCATC GCAGCCTAAC AAAATTAAAG AGCACGTATA CCGATAAGCT CCCCTTAATG
GTGAATGCAA AAACTGGCCG AGTGCATACT AGCTATCATC AAGCGAATGC GGCGACGGGG
CGTTTATCAT CGAGCGAGCC AAACCTGCAA AATATTCCGA TCCGAACCGT AGAAGGCCGT
CGTATTCGCC AAGCCTTTAT TGCCCCAGAA GGGCGTAAAA TTTTAGCCGC TGACTATTCA
CAGATTGAAT TGCGGATCAT GGCGCATTTA TCCCAAGATG CAGGTCTACT TAACGCTTTT
GCCGAAGGTA AAGACATTCA CCGCGCCACC GCTGCCGAAG TGTTTGGCAC CGACTTTGAT
AGCGTCACCT CAGAACAGCG TCGCCGCGCT AAGGCCGTTA ACTTTGGCCT TATCTATGGC
ATGTCGGCTT TTGGATTAGC GCGCCAGCTC GACATTCCGC GCAACGAAGC GCAAACCTAT
ATCGACACTT ACTTCGCCCG TTATCCAGGA GTATTAAGGT ATATGGAAGA AACGCGAGCA
AGTGCGGCTG ATCTCGGTTA CGTATCAACA TTATTCGGTC GTCGCCTGTA TTTACCCGAA
ATTCGCGATC GTAATGCAAT GCGTCGTCAA GCTGCCGAAA GGGCGGCCAT TAACGCACCA
ATGCAAGGTA CTGCCGCAGA TATCATCAAA AAAGCGATGA TCAGTATTGC CGATTGGATT
AAAACTGATA CCCAAGGTGA AATCGCCATG ATCATGCAAG TCCACGACGA ATTAGTGTTC
GAGGTCGATG CCGATAAAGC CGAGACGCTC AAACAAAAAG TGTGCGAACT TATGGCTAAA
GCGGCAAATC TGGATGTAGA ACTCCTAGCA GAAGCGGGGA TTGGTGATAA CTGGGATGAG
GCCCACTAA
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| Protein sequence | MPTIANNPLV LVDGSSYLYR AYYAPPHLTN SKGEATGAVY GVVNMLRSLL SRYQPSHIAV
VFDAKGKTFR NDLYQEYKAH RPPMPDDLRS QIEPLHRIIR ALGLPLISIP GVEADDVIGT
IARRASRENR AVLISTGDKD MAQLVDENIT LINTMTDTIM GPEEVAAKYG VGPDRIIDFL
ALMGDKADNI PGLPGVGEKT ALAMLTGAGS VANLLAEPEK VSELAFRGSK TMAAKIIDNA
DMLRLSYELA TIKTDVELEQ DWHELTAKPA DRDELIKCYG EMEFKRWLAE ILDNKAPATI
ATATTTVETE ADTTPSLALE TQYDTILTEA QLDEWIAKLK QASLFAVDTE TTSLDYMVAE
LVGMSFAVEA GKAAYLPLAH DYVGAPQQLD KQFALEKLRP ILEDAKLKKV GQNLKYDISV
LANAGITLQG VAFDTMLESY VFNSVASRHD MDGLALKYLG HKNIAFEDIA GKGAKQLTFN
QISLETAAPY AAEDADITLR LHQHLWPRLE KEAELASVFT DIELPLIHIL SDIERQGVFI
DSMLLGQQSE ELARKIDELE TKAYDIAGEK FNLSSPKQLQ VLFFEKLGYP VIKKTPKGAP
STAEEVLVEL ALDFPLPKVI LEHRSLTKLK STYTDKLPLM VNAKTGRVHT SYHQANAATG
RLSSSEPNLQ NIPIRTVEGR RIRQAFIAPE GRKILAADYS QIELRIMAHL SQDAGLLNAF
AEGKDIHRAT AAEVFGTDFD SVTSEQRRRA KAVNFGLIYG MSAFGLARQL DIPRNEAQTY
IDTYFARYPG VLRYMEETRA SAADLGYVST LFGRRLYLPE IRDRNAMRRQ AAERAAINAP
MQGTAADIIK KAMISIADWI KTDTQGEIAM IMQVHDELVF EVDADKAETL KQKVCELMAK
AANLDVELLA EAGIGDNWDE AH
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