Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4667 |
Symbol | engB |
ID | 1172250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 4864111 |
End bp | 4864770 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637346375 |
Product | ribosome biogenesis GTP-binding protein YsxC |
Protein accession | NP_720182 |
Protein GI | 24376139 |
COG category | [R] General function prediction only |
COG ID | [COG0218] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTGAAT CTCATATAGA TTTTCGCAGG GCGAAGTTTT TAATCAGTGC ACCAGACATT GCACATTTGG ATCAATATCT GCCCGGCGAC GTTGGTGTTG AGATTGCTTT TGCTGGCCGC TCCAATGCCG GAAAATCGAG TGCTCTCAAT GCATTAACTG AGCAAAAAAA CTTGGCTCGT ACCAGTAAAA CCCCTGGACG AACCCAGCTT ATTAACGTGT TTGAACTCGA TGCACAGCGC AGATTAGTCG ATTTACCAGG GTATGGTTTT GCCCAGGTAC CGTTAGCCAT GAAGATGAAG TGGCAACAAT CCCTAGCAGA GTATTTGCAA AAGCGTGCTT GCTTAAGTGG CGTTGTAGTT TTGATGGATA TCCGTCATCC CTTAAAAGAT CTGGATATGC AGATGATTGA ATGGGCTGTT GCGAGTGAAA TCCCAGTGTT AGCCCTGTTG ACCAAGTCGG ATAAACTGGC TCAAAGCGCG AAGATGAAAA CCGTTAACGA AGTTCGCAAA GCCCTCGCAG AGTTTGGCGA TTGGGTACAA GTCGAGTCTT TTTCAGCCCT TAAAGGCACG GGGAAACCTA AAGTATTGAG CATCTTAAAT GAATGGTGCC ATCCACAATG GCTGGCCAAT GAGTTAGAGA ATCAAGATAA CGCCGAGTAA
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Protein sequence | MTESHIDFRR AKFLISAPDI AHLDQYLPGD VGVEIAFAGR SNAGKSSALN ALTEQKNLAR TSKTPGRTQL INVFELDAQR RLVDLPGYGF AQVPLAMKMK WQQSLAEYLQ KRACLSGVVV LMDIRHPLKD LDMQMIEWAV ASEIPVLALL TKSDKLAQSA KMKTVNEVRK ALAEFGDWVQ VESFSALKGT GKPKVLSILN EWCHPQWLAN ELENQDNAE
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