| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4656.2 |
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| Symbol | |
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| ID | 1172240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4854008 |
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| End bp | 4856029 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637346365 |
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| Product | hypothetical protein |
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| Protein accession | NP_783550 |
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| Protein GI | 28275295 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3614] Predicted periplasmic ligand-binding sensor domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCTTGA TGATTGCCTT GCCTCCCGGA TATTCTGCGG CAATTTGGCC TGCGGCTGGG
GTTGCAATTG CTTCTTGTCT CTTGTGGAAA GGGCGTGCGC CTTGGGGTGG TGTTTTTATC
GGGTCGTTGC TGACAAATAT GAATATTGGT CAGGAGCTGC ACTTAGGTTG GTTACCCCTC
ATTATTGCTT TGGGCACGTT ACTGCAAACG ATTATTTCAG CGCGCATTAT TCAATATATT
GATCCTCAGT TGACCTTAGA CAAACCAGAA ACAGTCATAA AATCAATGGT AAGTCTAAGT
GCTAGCTGCT GTATTGCTTC TTTGTTTGGC AATGCTGCCC TTGTTTTGGG CGACACAATT
ACCAGTGCGG ATGTTGTTAG CAGTATGTTC AATTGGTGGA TGGGGGATTT TCTTGGTGCA
GTGATTTTTA TCCCGTTAAC CATGTTAGTG TTCGATAGGC GAGCGATTTG GCGCTCAAGA
CGGATTCAAA CTGGGCTTCC ATTGTTGGTT GGTTTTTTAC TCTGTATTGG GATTTATTAC
TACGCAGATA TGAACCAGCG GCAACAACTG CAGGATAAAT TTCAAATTCA ATCCAATGCC
ATTATTAGTA GTGTGGAAAG TTTTCAGGGA ACGAATCTAC AGCAGTTAGT TGCTTTAGCC
AGTCTATTTG ATAACAGTGA AAAGGTCTCT GAAAATGAGT TTATTCAGTT CGGTATACGT
AACCAACTGC AGTTAGATGG TTTTAGAGCT TGGGCTTGGT CACCGTTGGT TACACTAAGC
GATAAAAATA GTTTTGAGTC AGCAACTAGG GATGAGCTGG GGGGAGCTTT CAATATTAAA
TATTTACAAG ACGGTAAACC TAACGCCGAT GGTTGGCTTG CGCCTGTTAA GTATGTGCAA
CCCCTGAACA GTAGCCGAAG CGTACTTGGA TTGGATCTTA ACAGTGAGCC AGTAAGGGCC
GCGGCGATTG CAAAAGTGAG GGCAACACTT GCTCCTGTGA TGACGAGCAA GATTCAGTTA
GCAGAGGACC CTAATGGTCC CGGAGGCGCG CTACTGTTGG TGCCTTCCTT TGATCGTGTT
GGTAACATTA AAGGGTTTTG TTCGGCGGTC ATCGACATCG AAAGCATTAT TAATAAAGTT
GAACAAGTAA AAGGCTTGCA TTGGCGGCTG ACGGATATGA GTGCCGATGG GGCTTTGCTT
TACGCAAACA GTCAGAAAAA ATTTCCCAGT TTTTCAGGCA AGCTACATAG CGACAAATCC
GGCCAATACT ATCAAGCCCA TTTAATGCTT GCCGATCGTC ATTGGCATAT TGTTATTTAC
GAGTCCTATG CCGCCCTGAT GGGCGAAACC TTTAGTCTAT CGTTACTCCT GCTACTTTTA
GCCTTTATCA CCTGTGCGGT GGTGAGTGGG ATGACGTTAA TCTCTTCCGG TGAGCGGTAT
CGGATTGCGG ATAAAGTGGC CGAAAAAACT ATGGCGCTCT CGAAGGAGAT TGCGCGTAAT
CAAGCGTTTC AAGCCACCTT AGTTGAGAGT GAAGAAAAAT ACCGTAACCT GTTCGATAAG
GCACCCGTAG GCCATGTGTT AAAACGCCTT GAGGATAGTC AGTTTGTTGC AATTAACCAA
GCGTTTACCG AGATTACTGG CTACACATTG GAGGAACTAC AAGCACTTGA ACCTTGGGAC
CTCACACCGG TTCGTTACCG TGCAAGCGAA GCCGAGCAGC TTGAACGTCT CAAGCAAACA
CACCGTTATG GTCCCTATCA AAAGCACTAT CGCCATAAAG ATGGGCGGTT GGTAGCCGTC
AGGTTAAATG GTTCTTTAGT GACGGCGGCC AATGGTGAGC CGCTCATCCT GTTTGTTGTG
GAAGATATTA CCGAGCAAGA GCGCACCGTT GCTCGGGTAA ACCTGTTAGC GCAGGTTTTT
CAGCAAAGTG GTGAAGGCAT CACCATTATT GATGCTAATG ACATTATTGT GGATGTAAAC
AGCGCCTTTA CTCAAATTAC AGGCTACTCA AGGAGGAGAT AA
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| Protein sequence | MGLMIALPPG YSAAIWPAAG VAIASCLLWK GRAPWGGVFI GSLLTNMNIG QELHLGWLPL
IIALGTLLQT IISARIIQYI DPQLTLDKPE TVIKSMVSLS ASCCIASLFG NAALVLGDTI
TSADVVSSMF NWWMGDFLGA VIFIPLTMLV FDRRAIWRSR RIQTGLPLLV GFLLCIGIYY
YADMNQRQQL QDKFQIQSNA IISSVESFQG TNLQQLVALA SLFDNSEKVS ENEFIQFGIR
NQLQLDGFRA WAWSPLVTLS DKNSFESATR DELGGAFNIK YLQDGKPNAD GWLAPVKYVQ
PLNSSRSVLG LDLNSEPVRA AAIAKVRATL APVMTSKIQL AEDPNGPGGA LLLVPSFDRV
GNIKGFCSAV IDIESIINKV EQVKGLHWRL TDMSADGALL YANSQKKFPS FSGKLHSDKS
GQYYQAHLML ADRHWHIVIY ESYAALMGET FSLSLLLLLL AFITCAVVSG MTLISSGERY
RIADKVAEKT MALSKEIARN QAFQATLVES EEKYRNLFDK APVGHVLKRL EDSQFVAINQ
AFTEITGYTL EELQALEPWD LTPVRYRASE AEQLERLKQT HRYGPYQKHY RHKDGRLVAV
RLNGSLVTAA NGEPLILFVV EDITEQERTV ARVNLLAQVF QQSGEGITII DANDIIVDVN
SAFTQITGYS RRR
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