Gene SO_4640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4640 
Symbol 
ID1172221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp4836897 
End bp4837373 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content48% 
IMG OID637346347 
Productanti-oxidant AhpCTSA family protein 
Protein accessionNP_720156 
Protein GI24376113 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0678] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGCTC AAGGTCAAAA ATTACCAGCG GCGACGCTAA GCCAATTAAC AAAAGATGGC 
ATGGTAAATC ATCAAGTTAC CGAGCTGTTT GCGGGTAAGA AAGTGGTATT ATTTGCAGTG 
CCAGGTGCTT TCACACCAAC CTGTTCTGAA GCGCATTTGC CCGGTTATGT GGTGCTGGCC 
GATGAGTTAA AAGCCAAAGG CGTTGATTTA ATTGCCTGTG TATCGGTAAA CGATGCCTTC 
GTGATGAAAG CCTGGGGCGA AGCGCAAAAT GCGTCTGAGT TACTGATGCT TGCCGATGGC 
GATGCGAGCT TTACTAAGGC GCTCGGATTA GAGATGGATA CCGCAGGCTT TGGCGGTGTG 
CGTTCACAAC GTTATGCGAT GATCATCGAT AACGGCGTGG TGACGTTACT GAATGTTGAA 
GCACCTAAGT CATTTGAGGT GAGCAAGGCC GAAGTGGTGT TGGCGGCTTT AAGTTAA
 
Protein sequence
MIAQGQKLPA ATLSQLTKDG MVNHQVTELF AGKKVVLFAV PGAFTPTCSE AHLPGYVVLA 
DELKAKGVDL IACVSVNDAF VMKAWGEAQN ASELLMLADG DASFTKALGL EMDTAGFGGV 
RSQRYAMIID NGVVTLLNVE APKSFEVSKA EVVLAALS