| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4626 |
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| Symbol | bioH |
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| ID | 1172209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4821559 |
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| End bp | 4822251 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637346335 |
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| Product | bioH protein |
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| Protein accession | NP_720142 |
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| Protein GI | 24376099 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR01738] putative pimeloyl-BioC--CoA transferase BioH |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTTTACGC CACTGCATGA GCAACTGTCT GAGTATAGAG TGCACTATGT CGATCTGCCG
GGCTTTGGCT TAAGTCAGCC AATCGCAGGC AATTTATCCA CTTGGATCGA TGCGTTAATC
AATAACTTAC CCACCAATGC GATTTGGGCT GGCTGGTCGC TGGGTGGGTT AGTCGCAACC
CAAGCCGCCA TCGACTATCC ATCGCATATC AAGGGATTAA TTACTATCGC CTCTTCCCCC
TGTTTTATGG CAAGGGAAGA AGAAGCATGG CCCGGTATTC CACCACAGGT GCTCAGTATG
TTTGGCGAGC AACTTGGGCA AAACTTACCT AAAACCATTG AGCGTTTCTT AGCGATTCAA
GCCATGGGCA GTGAAACCGC CAAAGAAGAT ATCAAGCAGC TGCGGGATTT AGTCTTGGCT
CGCCCACTTC CCGATGCTGC GGCATTAACT CAAGGCCTTG ATATGCTGAA TCAAATTGAT
CTCAGAATGC AGCTATCGAG CATCAGCCAA CCTTGGCTAC GGATTTGGGG CAGGCTTGAT
GGACTCGTGC CCAAACGCGT GCAACCTCAA ATGCCAACGG CAAGCCACAT CACCGATGTG
ATGCTCGCCA AAGCATCCCA CGCGCCATTT GTGTCCCATA GGCAAGAATT CTTACAAGCA
CTCTTACCTT GGTTGACACA ATTCAAGGAC TAA
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| Protein sequence | MFTPLHEQLS EYRVHYVDLP GFGLSQPIAG NLSTWIDALI NNLPTNAIWA GWSLGGLVAT
QAAIDYPSHI KGLITIASSP CFMAREEEAW PGIPPQVLSM FGEQLGQNLP KTIERFLAIQ
AMGSETAKED IKQLRDLVLA RPLPDAAALT QGLDMLNQID LRMQLSSISQ PWLRIWGRLD
GLVPKRVQPQ MPTASHITDV MLAKASHAPF VSHRQEFLQA LLPWLTQFKD
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