Gene SO_4623 details

Gene Information

• Locus tag: SO_4623
• ID: 1172206
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 4819048
• End bp: 4819725
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637346332
• Product: DNA-binding response regulator
• Protein accession: NP_720139
• Protein GI: 24376096
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGGTAT TACTGGTTGA AGACAATCGG CTTCTCTCTA ACAACATCAT TCAATATCTT 
GAATTGAGTG GCATAGAGTG CGATTACGCG TTCAACCTAG CGCAAGCAGA AATGTTGATC 
AGCCAGCAGC AATTTGACGC CATCATCCTT GATCTTAATT TACCGGATGG TGATGGCATT 
GAGGCGTGTG AACGCTGGAA AGCGCAATGT TTTAGTTCAC CTATCATCAT GCTAACCGCC 
CGTAGCAGTT TGAATGAGCG CTTGGCTGGT TTTGCTGTTG GCGCTGATGA TTATTTAATA 
AAACCCTTTG CGATGGAGGA GCTGGTCGCG CGGCTGAAGG TGGTTGCCCA GCGTCGTCCT 
GCGCCCCAAA GGTTGACTAT TGGTGACCTA GAAATCGATT TTGCAAACCA CATGGTGTAT 
CGGCAAGGGC AACTACTGGC TTTGTCTAAA ACCGGATGGC AGATCATGGC TTTATTAGCG 
CGTCGTAGTC CAGAAACTGT GAGTAGAGAA GAGATTGAGC GAATGCTTTG GCCCGACAGC 
GCACCTGATA GTGACAGCTT GCGCAGTCAT ATTCATCTTT TGCGCCGAGT GATCGATCGC 
CCCTTTGAGC GGCAAATATT ACATACAATT CGTGGCGTTG GCTTAAGCCT TAGGGATGAA 
ATCAATGCAA GCGCCTAA 

 

Protein sequence

MLVLLVEDNR LLSNNIIQYL ELSGIECDYA FNLAQAEMLI SQQQFDAIIL DLNLPDGDGI 
EACERWKAQC FSSPIIMLTA RSSLNERLAG FAVGADDYLI KPFAMEELVA RLKVVAQRRP 
APQRLTIGDL EIDFANHMVY RQGQLLALSK TGWQIMALLA RRSPETVSRE EIERMLWPDS 
APDSDSLRSH IHLLRRVIDR PFERQILHTI RGVGLSLRDE INASA