Gene SO_4621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4621 
Symbol 
ID1172204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4816881 
End bp4817759 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content34% 
IMG OID637346330 
Producthypothetical protein 
Protein accessionNP_720137 
Protein GI24376094 
COG category 
COG ID 
TIGRFAM ID[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGCTTAG ATCACATAGT CATCATGATA TTCGTAGTAA CTTTATTATA TAACGTTTAC 
TGGTCTATGA GTATTTTAAA ATACTTCCTA GAATACATGG TTGAGAGGGA CTCTATGTGT
AAAAAAAGTG TAGCATCTAT TTTAGTCAGT GCAATTGTTT TTAGTGGTTC AGTATATGCT
GATGTGAATA AAACGAGCGT GGATTTAGGT TATAAGTTTT ATACCAGTGA CACAAAAAAT
GATAACCCAG GTGTTTTTAA TCAACCTTTT GTAAAGTTGA ATCATTTGGG AATTGCTGAT
TGGGGTACTT ACTTTGCTAA TCTTAAGCTC GAAAACCCTG CTGAAATCGC GGAAAACCAG
AAACATCTTG ATGGCAAAAC TACCATTAAG TCATTATTGA TACTTGAAAA TAAGCTCGGA
GAATCGCAGT TCAACTTCTG GACCCAGAAC TTTATCTCTG CGAGTGAAAC GCTAGTTGAA
GATAATCTTT ATTTAGGTGT TACCCATAAT GCAAAAATTC AAAATCTATC ACTAAACTAT
GGTGTTGGTT TAAATTATAC CATTGGTAGC TTTTCCCCCA CATCAGAGAA GTTTAATGAT
CTTTCAGGTT ATGCAGTGGT TTTAAATGCA AAGTATCCAT TTGAGTTGCT AGGGTTTAAA
CATAGTTTAA GTTTGAATTA TGAAGCACAA ATTGATCGGG ATGAAGCGCA TCAAGCATTA
TTTTCATATG ACAGCTATGG TCATCAGATC ATCACAACGT TACAAACAGG CTTCACTGAT
TCAATTTTTT CAAAATTATA TATCACTCAT TATGATAGCT GGGGCTCGCA ATATAATGAT
GGGATTGAAT ACGGTATATC TGTTGGTTAC CAGTTTTAA
 
Protein sequence
MGLDHIVIMI FVVTLLYNVY WSMSILKYFL EYMVERDSMC KKSVASILVS AIVFSGSVYA 
DVNKTSVDLG YKFYTSDTKN DNPGVFNQPF VKLNHLGIAD WGTYFANLKL ENPAEIAENQ
KHLDGKTTIK SLLILENKLG ESQFNFWTQN FISASETLVE DNLYLGVTHN AKIQNLSLNY
GVGLNYTIGS FSPTSEKFND LSGYAVVLNA KYPFELLGFK HSLSLNYEAQ IDRDEAHQAL
FSYDSYGHQI ITTLQTGFTD SIFSKLYITH YDSWGSQYND GIEYGISVGY QF