| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4617 |
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| Symbol | dinF |
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| ID | 1172200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4810765 |
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| End bp | 4812132 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637346326 |
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| Product | DNA-damage-inducible protein F |
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| Protein accession | NP_720133 |
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| Protein GI | 24376090 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTACTG CAAAATCCAC TGCACTCGCG CTGCTATTTA ATGGCACCAA GAATCGCCAA
CTGTTCGCGC TTGCCCTGCC GATGATCCTC TCCAATATCA CGGTTCCGCT ATTGGGATTG
GTAGATACGG CTGTCATCGG CCATTTGAGT GACGCCTATT ATTTAGGGGG CGTCGCACTC
GGGTCAACGA TTATCACATT AATCATTTGG TTATTAGGCT TTTTACGTAT GGCGACCACC
GGCTTAGTCG CACAGGCCTA TGGTGCAAAT GATATTAACG CCCAATTAAA ACTGTTGGTT
CAAGGCGCCA TGCTGGCGAC AGGACTTGGC ATCGCGATGA TCCTGCTACA AGTCCCGCTT
CTCAGTTTAG CGCTCAGCTT CTCCGAGGCG AGTGTAGAAG TTGAGCGTTA TTGCCGAGAA
TATTTTCAAA TTCGGATCTG GTCTACACCC TTCGCCCTGC TCAATTTAGT CATGCTGGGC
TGGCTCCTTG GCCGGCAACA ACCCAAGGCG GCGATGTGGC AGTTGATCTT CGCCAATGTG
GCTAACATTA TCCTCGATGT GCTGTTTGTA TTAGGATTCG GCTGGGGTGT AAAAGGCGCA
GCACTCGCCT CAGTATTTGC CGATATCACC GCCTTTAGCG TTGCGCTCTA CATGGTATTA
CAGCAAGTTA AGTTAATACC AAACTACCCA TTTGCCGAAA TCCGCGCCCA TATCCGCTTT
ACTGGTTTTG GCCAGTTGCT TCGGCTCAAT AGTGATATTT TTATCCGCAG CCTATGCCTG
CAAACTGCCT TCGCCTTTAT GACCTTTCAC GGCGCAGGCC TTGGTGACAA TACCGTCGCA
GCCAATGCGG TGTTATTGAA TTTACTGCTA TTAATCTCCT ATGCCCTCGA CGGCATCGCC
TATTATGCCG AGGCAGAAGT GGGCAAAGCC TATGGTCAAA AGCGCGCGCA GCAATTGCAT
GAAGCCGTGG TGCTGGCCTG GTGTTGGTCT GCCATCACGG CTCTTGGGTT TACCCTGATA
TTTAGCCTTT GGGGAAGCCA TATTATCGAA CTGTTGACCA GTATTGATGA GGTCAGAACC
ACAGCACAGA TTTATCTAAT TTGGTTGGTA TTGCTACCGC TTTGGTCTTT TAGCTCTTAC
CTATTCGATG GCGTTTATAT CGGTGCGGCG CAGGGCAAAG TGATGCGTAA CAGCATGATA
ATTGCAACAT TTGGCGCCTT CTTTCCGACA TGGTATTTAC TACAATCGCT ATTGCCTTCT
GAGCAGGCTA ACCATGCCCT CTGGGCGGCC ATGACGGCCT TTATGTTAAT GCGTAGCCTG
ACCCTTGCTG CACATTATCG CTTTAGTAAG ACATTTATTG TTAGTTAA
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| Protein sequence | MTTAKSTALA LLFNGTKNRQ LFALALPMIL SNITVPLLGL VDTAVIGHLS DAYYLGGVAL
GSTIITLIIW LLGFLRMATT GLVAQAYGAN DINAQLKLLV QGAMLATGLG IAMILLQVPL
LSLALSFSEA SVEVERYCRE YFQIRIWSTP FALLNLVMLG WLLGRQQPKA AMWQLIFANV
ANIILDVLFV LGFGWGVKGA ALASVFADIT AFSVALYMVL QQVKLIPNYP FAEIRAHIRF
TGFGQLLRLN SDIFIRSLCL QTAFAFMTFH GAGLGDNTVA ANAVLLNLLL LISYALDGIA
YYAEAEVGKA YGQKRAQQLH EAVVLAWCWS AITALGFTLI FSLWGSHIIE LLTSIDEVRT
TAQIYLIWLV LLPLWSFSSY LFDGVYIGAA QGKVMRNSMI IATFGAFFPT WYLLQSLLPS
EQANHALWAA MTAFMLMRSL TLAAHYRFSK TFIVS
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